Solanum pennellii: 107009278
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Entry
107009278 CDS
T04130
Name
(RefSeq) partner of Y14 and mago
KO
K14294
partner of Y14 and mago
Organism
spen
Solanum pennellii
Pathway
spen03013
Nucleocytoplasmic transport
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107009278
03015 mRNA surveillance pathway
107009278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107009278
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107009278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
107009278
NCBI-ProteinID:
XP_015064078
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Position
1:103542334..103547074
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AA seq
225 aa
AA seq
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MASSTTRGEDEAKQLAAELGKTLKEGERLLAPTRRPDGTLRKPIRIRAGYVPQDEVAIYK
SKGAIWKKEMESLQDVPPGYDPVMDEKPKSKAAKRNERKKEKRQQAALEKGKNPENDEVS
SAENSVDGPDQVQSVMSQINSLAISANPVVPPSNSTESSGMGDSLQDIDKKIRALKKKIR
LTEAQQQKTDEKDMKPEQLEKMAKLESWRKELKLLEDKKAELEAS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagcacgaccagaggagaggacgaagcgaaacaattggcagctgagctaggc
aaaaccctaaaagaaggggaaagactactcgcaccaacaagacgacctgacggaacactc
cgtaaacctattcgaattagggctggttatgtgcctcaagatgaagtcgccatttacaaa
tctaaaggcgctatttggaagaaggaaatggagtcactgcaggatgttccgccgggttat
gatcctgtgatggatgaaaagcccaagtctaaagctgccaagcggaatgaaaggaagaag
gagaagcgtcaacaggctgcccttgaaaagggtaagaatccagagaacgatgaggtctca
tctgctgaaaattcagttgatggtccagatcaggtccagtcagttatgtcccagataaac
agtcttgccatatctgcaaatcctgttgtccctccttcaaattcaaccgagtcttctggc
atgggagatagtctgcaggacattgacaaaaagatccgagctctgaagaaaaagattcgg
ctgacagaagctcaacagcagaagactgatgagaaggacatgaagccagagcagctggag
aaaatggccaagctggaaagctggagaaaagagttgaaactcttggaagataaaaaggct
gaattggaagcatcttga
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