Solanum pennellii: 107009424
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Entry
107009424 CDS
T04130
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 2 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107009424
03400 DNA repair and recombination proteins [BR:
spen03400
]
107009424
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
107009424
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107009424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
107009424
NCBI-ProteinID:
XP_015064246
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All DBs
Position
2:complement(47360091..47365860)
Genome browser
AA seq
887 aa
AA seq
DB search
MASRRRDFFMIDEVGAKKKAKVDEAEEEDTSQLPVVPWRVLLNAADCDLDFNVEGNGLLG
SGLYEHGFSYCWSGARANMGITGGKYCFGCKIVAEQPVKMDDTPLDQQQICRVGISRGDD
AVGNLGETLHSFGFVGTGKFSSQGRISNYGERFGVGDTIICCVDLESSPMASIGFSKNGK
WLGTSKQFNAGPGPTGLEVVDCPMKNLYWHSALFPHVLLKNVVVNMQFSINDGLAPVEGY
KPWSCAMEDGKAIPGPSFANLCDCEAMMMVGLPASGKSTWAEKWIKEHPEKRYVLLGTNL
ALDLMKVPGFLRKQNYCGRFEHLMDRATGIFNTLLSRASKIPRNFIIDQTNVHKNARKRK
LKPFANYKKIAVVIVPTPEELKFRGEKLFKEMGKKVPAEAVNQMLVNFVLPMSKDMHQAD
EYFDEVRFEELGRAEAQRCLDEMKANLNSEKEVTPYSRESSMQSHNSLSMQYPLEYQQSC
SGSSPQSLRNVPGGRLNSSYAQPQLQAPHESFYAIPSSYNPIGDFGHHGSHSAYGDSRGY
DMEARSAIHGEIYEPHVGSGAQNAAELHQSIMNDPNLRSVSGGSGAQNAAELHQSSMNDP
NLSMSGGFGAWNAAELHQSSMNDPNLRMSGGFGAQNAAELHQSSMNDPNLREMFGGSGAQ
NAAELHQSSMNDPNLRMSGGFGAWNAAELHQSSMNDPNLSMSGGFGAWNAAELLQSSMND
PNLSMSGGFGAQSAAELHHSSMNDPNLSMSGGFGAWNAAELLQSSMNDPNLSMSGGFGAQ
SAAELHQSSMNDPYLRMSGGSGYLPPDSRGPFESGMATPYGFRSVFPAGFSQEVPAPRPQ
HENYPSGAQHPGVSAPQGVPAPWPPHENYPSGAQHPGVYAPPGPRYY
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaggagacgtgatttttttatgattgatgaagttggtgccaagaaaaaagcg
aaggttgatgaagctgaagaagaagatacatcacagcttccagtagttccatggagggtt
cttcttaacgctgccgattgtgatttagatttcaatgttgaaggaaatggactactaggt
tcagggctttatgaacatggattttcgtattgttggtcaggtgctcgtgccaatatggga
atcactggaggaaagtactgctttggttgcaaaattgttgcagagcagcccgtaaagatg
gacgatacaccactagaccaacaacagatctgtcgtgttggaatctcaaggggagatgat
gcagtaggaaaccttggggaaaccctgcacagttttgggtttgtgggtactggaaaattt
tctagtcaaggaagaatttctaattatggcgaaagatttggggttggtgacacaataatt
tgttgtgttgaccttgagtccagccctatggcttccataggtttctctaaaaatggaaag
tggctgggaacatcaaagcaatttaatgcaggaccaggtccaactggtcttgaagtggtg
gattgtccaatgaaaaatctatattggcattcagctcttttccctcatgtgttgcttaaa
aatgtagttgtgaacatgcagtttagcataaatgacggactagctcctgtagaaggatat
aaaccgtggtcttgtgccatggaagatgggaaagccattccaggccctagttttgcgaat
ctgtgcgattgtgaagctatgatgatggtaggactacctgcttccggtaagagtacctgg
gctgagaaatggattaaggaacatccagaaaagcgatatgttctgcttggaactaattta
gctttggatctaatgaaggttcccggttttctgcgcaaacaaaactattgtggaagattt
gaacatttaatggaccgtgctactggtatattcaacactcttttgtctagggcttccaag
attcctcgtaatttcataattgatcagacaaatgtccacaaaaatgcccggaagcgcaaa
ttgaagccctttgcaaactataagaagatagctgttgtgattgttccaacacctgaagag
ctcaagttccgtggtgagaagctgttcaaagaaatggggaaaaaagttcctgctgaagca
gtaaatcagatgttagtgaattttgttttacctatgagcaaagacatgcatcaagcagat
gagtactttgatgaggtacgatttgaagaacttggcagggcggaggctcagagatgcttg
gatgagatgaaagcaaacttgaattcagaaaaggaagttaccccttattctcgtgaaagt
tcaatgcagtcacataatagcctgtcgatgcagtaccctttggaataccagcagtcgtgc
agtggttcatcaccacagagtctcagaaatgtaccaggtggacgtctaaatagttcgtat
gctcagcctcaacttcaagcacctcatgaatccttctacgcgatcccttccagttacaac
cccataggtgatttcggtcaccatggaagtcacagtgcctacggtgattcaaggggctat
gacatggaagccagatcagctatccatggagagatctatgagcctcatgtgggttctgga
gctcagaatgcagctgagttacaccagagcatcatgaatgatcccaacctgaggagcgtg
tctggtggttctggagctcagaatgcagctgagttgcaccagagcagcatgaatgatccc
aacctgagcatgtctggtggtttcggagcttggaatgcagctgagttacaccagagcagc
atgaatgatcccaacctgaggatgtctggtggtttcggagctcagaatgcagctgagtta
caccagagcagcatgaatgatcccaacctgagggagatgtttggtggttctggagctcag
aatgcagctgagttacaccagagcagcatgaatgatcccaacctgaggatgtctggtggt
ttcggagcttggaatgcagctgagttacaccagagcagcatgaatgatcccaacctgagc
atgtctggtggtttcggagcttggaatgcagctgagttactccagagcagcatgaatgat
cccaacctgagcatgtctggtggtttcggagctcaaagtgcagctgagttacatcatagc
agcatgaatgatcccaacctgagcatgtctggtggtttcggagcttggaatgcagctgag
ttactccagagcagcatgaatgatcccaacctgagcatgtctggtggtttcggagctcaa
agtgcagctgagttacaccaaagcagtatgaatgatccctacctgaggatgtccggtggt
tctggatatctaccacctgattcaagaggaccgtttgaatcggggatggctacaccatat
ggctttcgttctgtctttccagcaggcttttctcaagaggttccagctccgaggccacaa
catgaaaattatccctctggagcacaacatcctggggtatccgctccacaaggggttcca
gctccgtggccaccacatgaaaattatccctctggagcacagcatcctggggtatatgct
ccacctggtcccagatactactga
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