Solanum pennellii: 107009501
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Entry
107009501 CDS
T04130
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107009501
Enzymes [BR:
spen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107009501
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107009501
NCBI-ProteinID:
XP_015064328
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Position
2:58765781..58767819
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AA seq
404 aa
AA seq
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MSTLFFTFSLLLLAPLLVISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDDCW
RCDPNWGKNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEP
LWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQ
SGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN
NYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR
QTGAGASSSSTYARASSLSARPSSLVGSITTNAGPINCKRGSRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtctactcttttcttcacattttccctccttcttctagcaccactactcgtaattagt
tcaatccaagacccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattg
acgaggaggaatttgggctatttatcgtgtggatcagggaacccaatcgacgattgctgg
cgatgcgaccccaattggggaaaaaatcgccaacgtttagctgattgcgccattgggttt
ggaaagaatgctatcggaggaaaaaatggccgaatttacgtggttactgattcagggaac
gatgaccccgtgaaccccaaacccggaaccctgagacatgctgttatacaagacgagcct
ttatggattattttcaaaagagatatggtcattcagctcaaacaagagcttgtcatgaac
tcttataagaccatagatggtcgtggcgcgagtgttcacatttcaggtggtccgtgcatt
acaatccaccataccagcaacattataatacacgggattaatatacacgattgtaaacag
agtggtaacggcaacattagggactcgccaaaccattccggatggtgggatgtttctgac
ggtgatggtatttcaattttcggagggaaaaacatttgggtggaccattgttcgttgtct
aattgccacgacggtttaattgatgcaattcacggatctacagcaatcacgatttctaac
aactattttactcatcatgataaggtgatgttgttgggacatagtgattcttttacacag
gacaaaggcatgcaagtcacagttgcttttaatcattttggtgaagggttggtgcaaaga
atgccaaggtgcagacatggttacttccatgtggttaataatgactatactcactgggaa
atgtatgccattggtggtagtgctgcacctactattaatagccaaggcaacagatttctt
gctcccaatgaaaaataccgcaaagaggtgacaaagcatgaggatgcaccagaaagtcag
tggagaagctggaactggagatcagaaggtgatttgatgttaaatggagcgtatttcagg
caaacaggggcaggtgcatcatcatcatctacttatgccagagcttcaagcttaagcgcc
aggccttcttctttagttggatcaatcaccacaaatgccggtccgattaactgcaaaaga
ggctctcgctgctag
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