Solanum pennellii: 107009628
Help
Entry
107009628 CDS
T04130
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107009628
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107009628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
DUF4399
Motif
Other DBs
NCBI-GeneID:
107009628
NCBI-ProteinID:
XP_015064463
LinkDB
All DBs
Position
1:complement(94481767..94496410)
Genome browser
AA seq
870 aa
AA seq
DB search
MNFEQRLIAAAKFVYAGDSVADDPPVNSVDLGVEAALKPHQVEGVSWLVRRYLLGVNVIL
GDEMGLGKTLQAISLLSYLKVYLKTPGPFLVLCPLSVTDGWMFEMANFAPKLRVLSYTGD
KEHRRNLRRKIYESMNREALDAKSLPFDVLLTTYDIVLLDEDFLSQVPWCYAIIDEAQRL
KNPSSVLYNVLKERFVMPRKLLMTGTPIQNNLSELWALLRFCMPSVFGTLEQFLSAFKEA
GDPSCLDADKAKEQFKILKYVIGAFMLRRTKSQLIELGTLVLPPLTEITVMAPLVALQKK
VYMSILRKELTQLLALASGAPSTRSLQNIVIQLRKACSHPYLFAGIEPEPYEEGEHLVQA
SGKLLILDHLLQKLHACGHRVLLFSQMTQTLDILQDYLELRKYSYERLDGSIRAEERFAA
IRSFSHNRSKFEAEQNAAFVFLISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH
RIGQTNHVLSINLVTEQSVEEVIMRRAQRKLQLSHNIVGDDVLDQEGKEMAGAEAGDLRS
VMLGLHMLDPAEVTNEESDKFDRNELTAMAETIMAFRNKESSARDDKFEVKPANFLSEFN
VVTKRGPESVKLDQILDETSYLEWVEKFKEASQINHNPIFELGNRRSLPEEKHLKAEAAK
KKAEEEKMSKWETLGYHSLSVKDPVSAPDTDISSDSGAVHFVYGDCTRPSKVSPSEPTII
FSCVDTSGNWGHGGMFDALARLSTSVPAAYERASEFGDLHLGDLHLIEITEDLAKGSGSP
QCVALAVVQSYNPRRKVPRGSISIPDLERCLSKASYSAAQKSASIHMPRIGYQDGSDRSE
WYTIERLLRKYAALHGINIYVYYFRRASQS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgagcagagattaatcgctgcggcgaagtttgtctacgccggtgattcagtt
gccgatgatccgccggtcaactccgttgacttaggagtcgaagcggctcttaaacctcac
caagttgaaggagtctcatggctcgtccgaagataccttctcggcgtcaacgtcattctc
ggggatgagatgggattggggaagactttgcaagctatatcattgttgagctacctgaaa
gtctatctaaagactcctggaccattcttggtactctgtcctcttagcgtgacggatggt
tggatgtttgaaatggccaattttgccccaaaattgagagtgctatcctatactggagac
aaggagcatcggcgcaacttgcgtaggaagatatatgagagtatgaacagggaggctttg
gatgcaaaatcactaccttttgatgtgcttttaactacttacgacatagtattacttgat
gaagattttctatcccaagttccttggtgttatgcaataattgacgaagcacaaaggctc
aagaatccatctagtgtcctgtataatgtgctcaaagagcgttttgttatgccaaggaaa
ttgctgatgactggcacacccatacaaaacaacctttctgagctttgggctcttttgcgc
ttttgtatgccttcagtttttggaacactggagcagttcctctctgcattcaaggaagct
ggagatccatcatgtcttgatgcagacaaagctaaggaacaattcaaaattttgaaatat
gtaataggggcgtttatgctccgacgaactaaatctcagcttatcgagttggggactctt
gtgctgcctcctcttactgagatcactgtgatggcaccactggtggccctgcaaaagaag
gtatatatgtctatactaaggaaggagctaactcagctgctagcacttgcttctggagca
cccagtactcggtcgttgcagaatattgtaattcaactacgaaaagcatgtagtcatcct
tacctttttgctggtatagaaccggaaccatatgaagagggagaacacctggttcaggct
agcggcaagctgctaatattggatcatcttcttcaaaaacttcatgcttgtggacacagg
gttcttcttttctctcagatgactcaaacacttgatatactgcaggattatctggaattg
aggaagtattcttatgagcgtcttgatggttcaattcgtgcggaagagcgctttgctgca
atcaggagctttagtcataatagatcaaagtttgaagctgaacaaaatgcagcatttgtt
ttcttgatttcaacaagagctggtggagttgggttgaatcttgtggctgctgatacagtc
atattttacgagcaagattggaatcctcaggtagacaagcaggccttgcaacgtgctcac
cgaattggtcaaacaaaccacgtgttatctataaatttagtcacagagcagtcagtggag
gaggttatcatgcgtagagctcaacggaagttacagcttagtcacaacattgtaggagat
gatgtcttggatcaggaagggaaagagatggcaggagctgaagctggtgacttgcgatct
gttatgcttggcttgcatatgctagatcccgcggaagtaaccaatgaagaatcagataaa
tttgataggaatgaattgactgcaatggcagaaacaattatggcgtttcgcaataaagaa
agttcagctagagatgacaagtttgaggttaagccagctaacttcttaagtgagtttaat
gtggttacgaaaaggggtccagagtctgttaagcttgatcaaattcttgatgaaacttcg
tatctcgagtgggttgagaaattcaaggaagcatcacagataaaccataatccaattttc
gagctgggaaacaggcgaagcttgcctgaagaaaaacatctaaaagctgaagctgcaaag
aagaaggcagaggaggagaaaatgtcaaaatgggagactcttggataccactccttatcg
gtcaaagatcctgtatcagctcctgatactgatatctcgtctgattctggagccgttcac
tttgtttacggtgactgcacccgtccttctaaagtgtctccatcagagccgaccatcata
ttcagctgtgttgatacatcaggaaactggggtcatgggggtatgtttgatgcattggca
agactgtcaactagtgtacctgcagcgtatgaacgagcttctgaatttggtgatcttcat
ctaggcgatcttcatcttatagagatcacagaggatctagctaagggcagtggttcacct
caatgtgtagctttggctgttgtgcagtcatacaaccctaggcgcaaagtcccacgcggc
agtatctccatccccgacttggagagatgtctgtcaaaggcatcgtattcagctgctcag
aagtccgcatcgatccacatgccaagaatcggttatcaggatggttctgacaggtcagaa
tggtatacaattgaacgtctgctgcggaagtatgctgctctccatggcataaatatttat
gtgtattatttccgacgtgcatctcagagctaa
DBGET
integrated database retrieval system
