Solanum pennellii: 107009654
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Entry
107009654 CDS
T04130
Name
(RefSeq) UV-stimulated scaffold protein A homolog isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
spen
Solanum pennellii
Pathway
spen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107009654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
107009654
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107009654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
107009654
NCBI-ProteinID:
XP_015064485
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Position
1:complement(97388227..97392154)
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AA seq
668 aa
AA seq
DB search
MEEEKDKMVVAGLIDKATNSTRPEVEPRLLKSIKSVVRSSDSELRLAAQTLISLMKRDHS
QVRYLALLIIDELFMRSKLFRTIVVENLDQLLTLSVGFRRNLPLPPPASVASVLRPKAIE
FLEKWNSSFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARIRQERREREMRTKEILLKKF
ETLKENLASIKDEIQSTVDEIGECLNILSTKDEEDILLPSLDDEDIVEFRNSELRQIRLD
SLKEGEKIKVDSENEVVFDALRELFKVLVTNHMVTLQEWISVLIRVETTDTSFRDAILKD
FIDIRNHLKSVKKKCEESGCTLPKTRSVEDEDIWEEGNVEPENGKLFKMPDQGEDCSLNL
NFNGMRVEAPECSNVSLKGKEKLQEAKGGSETDTSRGKLLAEAPVMKWGSFLDDWGSTSR
DALANQRGLDLDGHWGRVDHDAVIPAEKIAELKVHATVYREDPVEIQPCRAPLRNGELCQ
RRDLKICPFHGPIIPRDDEGKPIDTGSSIEDQAAQLVDQQEPINACPSVAEKIHDLDDKL
VEKLAKQAVKNVRQRDREETKKREQDKQILKRAKLAKVREHNQEVLRDAALASTSRSLHA
GEDQDRSSLSKSSSTSKKETLASMLKKKETAKDRLGQRLLNARVRDATVRQLTVAEDSNY
REAFPNQW
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaaaagataaaatggtggtagcagggttaattgataaagccaccaactcc
accagaccggaagtggagccccgacttctcaaatccatcaaatcggtggtccgttcctct
gattccgagctccgactcgctgcgcaaaccctaatttccctcatgaaacgtgaccactct
caggtacgatatctcgctcttctcataatagatgaactctttatgcgctcaaagcttttt
agaactattgttgtcgagaacttggatcagttactcacattaagtgttggcttcagaagg
aatctgccgcttccgcctcctgcctctgttgcttctgtattacgccccaaagcaattgag
ttcttagagaagtggaattcttcatttggtattcattataggcagctcaggctggggtat
gactatttgaagaacaccctccgctttcaatttccaaatttgcaagcaaatgcagctagg
attcggcaggaaaggagggaaagagagatgaggacaaaggagatcctgctgaagaagttt
gaaaccttgaaggagaaccttgcttctataaaagatgaaattcagtcaacagttgatgaa
attggcgagtgtttgaacattttaagcacaaaggacgaagaagatatattgttgccttct
ttagatgatgaagatattgtggagttccgcaactctgaactccgacaaatccgtcttgat
tccttgaaggagggggaaaagattaaagttgacagtgagaatgaagttgtatttgatgca
ttgagggaactattcaaggttctagtaacaaaccatatggtcacattgcaagaatggatc
tctgttctcataagagtggaaacaaccgacactagtttcagggacgccatattaaaggat
tttattgatattcgtaatcatctcaaatcagtgaagaaaaaatgtgaagaatctggttgt
actctgcctaaaactagaagtgtcgaggatgaagacatatgggaagagggtaatgtggaa
ccagaaaatggaaaattgtttaaaatgcctgaccaaggtgaggattgttccttgaatctg
aattttaatggaatgagagttgaagctcctgaatgtagtaatgttagtcttaagggaaag
gagaagttgcaggaggccaaaggtggcagtgaaactgacacctctagaggcaagctttta
gctgaagctcccgttatgaagtggggttctttcctggatgattggggatcaaccagcagg
gatgctttggcgaaccaaagaggattagatcttgacggccactggggtagggtggaccat
gatgcggtgattcctgctgaaaaaattgcagaattaaaagtccatgcaactgtttatagg
gaagaccctgttgaaatccaaccatgtcgagcccctttgcgaaatggagaactttgtcag
aggagagatttgaaaatttgtccatttcatggacctattattcctcgagatgacgaaggc
aaaccaattgatacaggctcatcaatagaagatcaggctgcacagttggtggatcagcaa
gagcccatcaatgcatgcccttcagtagcggagaaaatacatgatttggatgataaactt
gtggaaaaattagccaagcaggctgtaaaaaatgtccgacaaagagatagagaggagaca
aagaagagagagcaggacaaacagattttgaagcgggcaaagcttgcaaaagttcgagaa
cataatcaagaagttctacgtgatgctgcactggcgtccacctcaagatccttacatgct
ggagaagatcaggatagatcgtctttatctaaatcttcgtccacgagtaagaaagaaact
ctggcatctatgttaaaaaagaaagaaactgccaaagatagattgggtcaaaggcttcta
aacgcccgtgttagagatgcaacagtacgacagttaacggtggctgaggattcaaattat
cgtgaagcctttccaaatcagtggtaa
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