Solanum pennellii: 107009686
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Entry
107009686 CDS
T04130
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
107009686
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107009686
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Chromo_2
Motif
Other DBs
NCBI-GeneID:
107009686
NCBI-ProteinID:
XP_015064520
UniProt:
A0ABM1G1B5
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Position
1:complement(95627509..95633354)
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AA seq
603 aa
AA seq
DB search
MGVGGNFWDLLKPYARPEGFDFLRNKRVAVDLSYWIVQQETALKGQIRNPHIRLTFFRTI
NLFSKFGAYPVFVTDGTASPLKSQARIARFFRASGIDLSSLPVAEEGISIERNKAFQKCE
KECVDLLELLGVPVLKAKGEAEALCAQLNREGLVDACITSDSDAFLFGANCVIKNMQPNS
NEPFECYHMSDIESGLGLRRNQLIAISLLVGNDHNLTGVPGIGIETAVRFVKSFSDDEIL
YRLREIGGGDLQDFQHNVNLDSSLIPSSDESPRKTKVPHCSICGHPGSKKAHLKFACQYC
SSTAKEGCIKKPLGFKCDCAPCDLDNQEKEQKRNKNWKLKVCRKIASEQNFRNNEITEMY
LNKQQQYDGDYHLSWENPKIDMIVDYLAYYQHWEPSYTRQRMFPMLSTIFLRDVASNSKD
QFLGGQYEFDSIQRVKTRFGHQLYVINWKKPTREMSNVICIPSEDSDTEQELGIADESTD
LLNEPDSPQIHVKEGCNFLSTEEDMVLVQNAFPEKVSLFLRDKELKESRSRRKRPMKSEN
SESPKGVQLSITNFYRSSKVPCHEKPEESETGCPKISADTSRERDKEPIRNHSKSVRRKL
LFD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcggtggaaatttctgggatttattgaaaccttacgctcgacctgaaggattt
gatttcttgagaaacaaacgcgtagctgtcgacttgtcatattggatcgttcagcaagaa
actgcactcaaaggccaaattcgaaatccacatatcagactcacttttttccgtaccatc
aatctcttctctaagtttggggcatatcctgtttttgtcacggatggcactgcatcacca
cttaagtctcaggcaaggattgcacgattttttcgggcatcaggaattgatttatcaagt
ttgccagtggctgaggaaggcatttcaattgaaaggaacaaggcatttcagaaatgcgaa
aaagaatgtgttgatttgcttgaactcctaggagtgccagtcctaaaagcaaaaggagaa
gcggaagcactctgtgcacagttgaatagggaaggactagttgatgcgtgtataacttct
gacagtgatgcatttctcttcggagccaattgtgttatcaaaaatatgcaacccaactcc
aatgaaccatttgagtgctatcacatgtcagatattgagtctggtctagggctgagaagg
aatcagttgatagcaatttcgcttttggtgggaaatgaccacaacttgactggtgtacca
gggatcgggattgaaacagcagttcgttttgtcaaatctttcagtgatgatgagattttg
tataggttgagggaaataggtggaggggatctacaggattttcagcacaacgtcaactta
gacagtagtttaatacccagttcagatgagagccctcggaaaaccaaagttccacattgt
tcgatctgtggacatcccggaagcaagaaagctcacctcaagtttgcttgtcaatactgc
agttccaccgccaaagagggttgcattaagaagccattgggcttcaagtgtgattgcgcc
ccatgtgatttggataatcaggaaaaagaacagaaaagaaacaagaattggaagctcaaa
gtttgcagaaagatagcctcagagcagaatttccgaaacaatgagatcacagaaatgtac
ttgaacaaacaacagcaatatgatggtgattatcatttatcatgggaaaatccaaagatt
gatatgatagttgattatctggcttattatcagcactgggagccatcttatacacgtcaa
agaatgtttcctatgttatccaccatatttctgagagacgtggcctcaaattccaaagat
caatttttgggcggacaatatgaatttgattccattcagcgggtgaagacaagatttgga
catcaactttacgtgatcaattggaagaaaccaacacgcgaaatgagcaatgtaatctgc
ataccttctgaagactctgatacggaacaggagctggggatagctgatgagtccacagat
ttacttaatgaacctgattctccgcagattcatgtcaaggagggatgcaactttttgtca
actgaagaagatatggtgcttgtacagaatgcttttccagaaaaggtgtccctgttcttg
agagacaaggaactaaaagaatcaagatcacgtagaaaaaggccaatgaagtctgagaat
tcagaatcaccgaaaggtgttcaactcagcatcaccaacttctatcgatcatccaaagtc
ccttgtcatgagaagccagaggagagtgaaactggatgtccaaagattagtgcggatact
tctagagaaagagataaagaacccatccgaaaccactccaagtcagttagacgcaagctt
ttgttcgattag
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