KEGG   Solanum pennellii: 107010267
Entry
107010267         CDS       T04130                                 
Name
(RefSeq) ras-related protein RHN1
  KO
K07889  Ras-related protein Rab-5C
Organism
spen  Solanum pennellii
Pathway
spen04144  Endocytosis
spen04145  Phagosome
spen04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:spen00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107010267
   04145 Phagosome
    107010267
   04148 Efferocytosis
    107010267
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spen04131]
    107010267
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spen04147]
    107010267
   04031 GTP-binding proteins [BR:spen04031]
    107010267
Membrane trafficking [BR:spen04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    107010267
 Endosome - Lysosome transport
    107010267
Exosome [BR:spen04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107010267
  Exosomal proteins of other body fluids (saliva and urine)
   107010267
  Exosomal proteins of colorectal cancer cells
   107010267
  Exosomal proteins of bladder cancer cells
   107010267
GTP-binding proteins [BR:spen04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    107010267
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase TsaE ATPase AAA_16
Other DBs
NCBI-GeneID: 107010267
NCBI-ProteinID: XP_015065002
LinkDB
Position
2:complement(34062156..34067842)
AA seq 200 aa
MAATAHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNSTVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTDSFARAKKWVQELQKQGNPNMVMAL
AGNKADLEDKRKVTAEEAHLYAEENGLFFMETSAKTAVNVNDIFYEIAKRLPRAQPAQNP
AGMVLVDRTAEGSRTASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggcaactgctcacaataatctcaatgcaaaactcgtgttgttgggggacatggga
gctggtaaatcaagcttggttatacgattcgtcaagggacaattccttgaattccaagaa
tcgacgatcggagcggctttcttttcctctactgtttcggttaacaattctacggtgaag
tttgagatctgggatactgctggtcaggagaggtaccatagcttagcgcctatgtactac
aggggtgctgcagctgctatcatcgtctatgacatcaccagcactgattcatttgcacgg
gcaaagaaatgggtgcaagaattgcagaagcaaggtaatccgaatatggtaatggctctt
gctggcaataaggctgatctagaagataagaggaaggtgactgcagaagaagcacacttg
tacgcagaggaaaatggcctatttttcatggaaacctctgccaaaactgctgttaatgtc
aacgatatattttacgaaatcgctaaacgattgcctagagctcagcctgctcaaaatccg
gcaggaatggtacttgttgacagaacagcagaaggatcgcgaactgcatcatgctgcagt
taa

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