Solanum pennellii: 107010642
Help
Entry
107010642 CDS
T04130
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107010642
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107010642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
107010642
NCBI-ProteinID:
XP_015065406
LinkDB
All DBs
Position
2:52940420..52948635
Genome browser
AA seq
792 aa
AA seq
DB search
MSATLLVAPNSNTLCCHHANSFINKKTLLFSKSFNSKFTTFSSQSNDNNNPIKNVEQCNL
EFENQDYGSSSSGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDNNLAKTQNPNDALSGK
VSGGRGKKAMKMIYQGIDKLQETQIGECTQVETDVKVEFQFPPGSLSEWGDVSYEIEEKN
PYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMKKEKVVMTAESN
LDAMLLERLKGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLPLCRNMDRA
REIVEMKTGGFVVWMKQNALVVYRGCSYTIQQKELQHDFLCSHQNPSFTENIEETSIFSP
LNLSGSSEDEMISVGNSEEDSLVMNESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLL
PEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAALVKLW
EKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVAKLVA
EREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQTIAEPGKEKSEVAVQL
MSEKERLEKEVRNQQHSLYILKKKIEKSSIALGKLNAAWRPAKEDDDKEILTQEERRSLR
QIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAKLLETESGG
ILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQRLGSLKFYANQTEQ
AISDLKLKLNIQ
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctactttacttgtcgctcccaattcgaataccctctgttgtcaccatgccaat
tcgtttatcaacaaaaaaactcttcttttttccaaatctttcaattctaaatttaccacc
ttttcctctcaatccaatgataataataatcccatcaagaacgtggagcaatgcaatctt
gaatttgaaaatcaagattatgggtcatcaagttcaggaattaaaggccctactgctcca
tggatgaggggtcctcttcttcttgaacctaatcaagttttggacttatccaaatcaaga
aaaaagaaagataacaatttggctaaaacccaaaaccctaatgatgcactttctggtaaa
gttagtggaggaagaggtaaaaaagcaatgaagatgatttatcaaggaattgataaactc
caagaaacgcaaattggggaatgtacacaggtggaaactgatgtgaaggttgaatttcag
ttcccaccaggatctttatctgaatggggagatgtgagttatgaaattgaggagaaaaac
ccatatggggaggaggacaatgtggaaagcctcgagggagtggaatttggtgttttatcg
agagaaggggaaggaagagggagtagaaaaagtggggcgagaatgccatgggagagtgag
gagagaattgtgtataggagaatgaagaaggagaaagttgtcatgactgcagagtcgaat
cttgatgcaatgttgcttgagagattgaagggtgaggctgcaaggattcagaagtgggtg
aaggttaagaaagcaggagttacccgaactgttgttgatcaaattcaatttatttggaag
aataatgaacttgcaatgctcaaatttgacctgcctttatgccgtaatatggacagagct
cgagaaattgtcgagatgaagactggaggctttgttgtttggatgaagcaaaatgctctg
gttgtttatagaggatgtagctatactatacaacaaaaggagctacagcatgattttcta
tgtagtcaccagaacccttcttttactgaaaatattgaagagacaagtattttctcacca
ttgaacttaagtgggagcagtgaagatgaaatgataagtgttggaaactcagaagaggat
agcctagtaatgaatgagtcactttatgagagggaagctaatagattgttggatgactta
ggacctcgttatgttgattggtggtggccaaagcctttgcctgtggatgcggatttactt
cctgaagtagttcctggatttaagccaccatttagactttgcccaccacgttcaagatca
aagctgacagatgatgaacttacacaattaaggaaacttgctcgttctttgccaactcat
tttgtccttgggagaaacagaaaactgcaaggcttggcagcagcactcgtaaagttgtgg
gagaaatgtcatatagcaaagatagctttgaagtggggaattccaaatgctagcaatgag
ctaatggcaaatgagttaaagtatcttacaggaggagtccttttattgcggaataagttc
tttataatcctatacagaggcaaggattttctcccttctcaagttgcaaaacttgtagct
gaaagggaggtggagctcacaagatgtcagcttgaggaagaagttgcacgattcaaagcg
attgaaactcttccaatcactatggaagcatcaatgagcagtagtattgttgggacttta
tcagaattccagacaattgcagaacctggaaaggagaaatctgaggttgcagttcaattg
atgtctgaaaaggaaagattagaaaaagaagtgaggaatcaacagcacagcctttacatt
ctcaagaagaagattgaaaaatcatctatagcactgggaaagctaaatgctgcctggaga
cctgccaaagaggatgatgataaagaaatcttaacacaggaagaaagacgatctcttagg
cagataggattgaagatggacaggagtttagttcttgggagacgtggtgtttttgatggt
gtcttagctggtctccatcagcattggaagcacagagaagttattaaggtgatcacaatg
cagaaaatcttttctcaggtcattcatactgcaaagctcctggagacagaaagtggtgga
atactgatttcggttgacaaaattaaagaaggccatgcaataataatttatcggggaaag
aactacagacgcccagagttggttcctcaaaatcttctaaacaaaagacaagctttatgt
cggtccctggaaatgcagagacttggatcattgaagttttatgcaaatcaaacggagcag
gcaatctctgatcttaagttgaaattgaatatacagtaa
DBGET
integrated database retrieval system
