Solanum pennellii: 107010901
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Entry
107010901 CDS
T04130
Name
(RefSeq) soluble starch synthase 3, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
spen
Solanum pennellii
Pathway
spen00500
Starch and sucrose metabolism
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
Module
spen_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107010901
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spen01003
]
107010901
Enzymes [BR:
spen01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
107010901
Glycosyltransferases [BR:
spen01003
]
Polysaccharide
Storage polysaccharide
107010901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
DUF3592
Peptidase_M2
Motif
Other DBs
NCBI-GeneID:
107010901
NCBI-ProteinID:
XP_015065647
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Position
2:48430361..48447251
Genome browser
AA seq
1224 aa
AA seq
DB search
MDVPLPLHRPLNAITHLKIKPFLGFVSHGTTSLSVQSSSWRRDGMLTGVPFPFCANFSGR
RRRKVSTPRSQQSSPKGFVPRKPSGMSTQRKVQKSNGDKESQNTSTSKESEIPNQKMVEA
KVETSDDDTKGVVRDHKFLEDEDEINGSTKSISMSPGHGSSQFVESEETGDDDNDAVKLN
ESKRLEESDFLIDSVIREQSGSQGETNDSSKGSHAVDTKFYEILQVDVEPQQLKEINAGS
VEYTGPVASKLLEITKASDVEHTESNEIDDLDSNSFFKSDLAEEDDPLTAGTVEIGDSSL
NLRLEMEANLRRQAIERLAEENLLQGTRIFCFPEVVKPDEDVEIFLNIGLSTLKNEPNVL
IMGAFNEWRYRSFTTRLTETHLNGDWWSCKIHVPKEAYRADFVFFNGQDVYDNNDGNDFS
ITVEGGMQIIDFENFLLEEKRREQEKLAKEEAERERLAEEQRRIEAEKAEIEADRAQAKD
ETAKKKKVLQELMAKATKTRDITWYIEPSEFKCEDKVRLYYNKSSGPLSHAKDLWIHGGY
NNWKDGLSIVKKLVKSERIDGDWWYTEVVIPDQALVLDWVFADGPPKHAIAYDNNHRQDF
HAIVPKHFPEELYWVEEEHQIFKTLQEERRLREAAMRAKAEKTALLKAKTKERTMKSFLL
SQKHVVYTEPLDIQAGSSVTVYYNPANTVLSGKPEIWFRCSFNRWTHRLGPLPPQKMLPA
ENGTHVKATVKVPLDAYMMDFVFSEREDGGIFDNKSGMDYHIPVFGGVAKEPPMHIVHIA
VEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLKMNNVKDFRFHKSYFWGGTE
IKVWFGKVEGLSVYFLEPQNGLFWKGCVYGCSNDGERFGFFCHAALEFLLQGGFSPDIIH
CHDWSSAPVAWLFKEQYTHYGLSKSRIVFTIHNLEFGADLIGRAMTHADKATTVSPTYSQ
EVSGNPVIAPHLHKFHGIVNGIDPDIWDPLNDKFIPIPYTSENVVEGKTAAKEALQQKLG
LKQDDLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQL
HSTYNDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGL
YDTVFDVDHDKKRAQQCGLGPNGFSFDGADAAGVDYALNRALSAWYDGRDWFNSLCKQVM
EQDWSWNRPALDYLELYHAARKLT
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggatgttccattgccactgcatagaccattgaatgcaataacccacctcaagatcaaa
ccttttcttgggtttgtttctcatggaaccacaagtctatcagtacaatcttcttcatgg
aggagggatggaatgcttactggggttccatttccattttgtgcaaatttctcgggaaga
agacggagaaaagtttcaactcctaggagtcaacaatcttcacctaaggggtttgtgcca
aggaagccttcagggatgagcacacaaagaaaagttcagaagagcaatggtgataaagaa
agtcaaaatacttcaacatctaaagaatctgaaattcccaaccagaagatggttgaagca
aaagttgaaaccagtgatgatgacactaaaggagtggtcagggaccacaagtttctggag
gatgaggatgaaatcaatggttctactaaatcaataagtatgtcacctggtcatggatca
tctcaatttgttgaaagtgaagaaactggtgatgatgacaatgatgctgtaaagttaaac
gaatcaaagagattggaagagagtgattttctaattgattctgtaataagagaacaaagt
ggatctcagggggaaactaatgacagtagcaagggaagccatgctgtggataccaaattt
tatgagatattgcaggtggatgttgaaccacaacaactgaaagaaattaatgctgggagt
gttgaatacacaggacctgtagcaagtaagctattggaaattactaaggccagtgatgtg
gaacacactgaaagcaatgagattgatgacttagacagtaatagtttctttaaatcagat
ttagctgaagaggatgatccattaaccgcaggaacagtggagattggagattcttctcta
aacttaagattggagatggaagcaaatctacgtaggcaggctatagaaaggcttgccgag
gaaaatttattgcaagggaccagaatattttgttttccagaggttgtaaaacctgatgaa
gatgtcgagatatttcttaacataggtctttccactttgaagaatgagcctaatgtcttg
attatgggagcttttaatgagtggcgctataggtcttttactacaaggctaactgagact
catctcaatggagattggtggtcttgcaagatccatgttcccaaggaagcatacagggct
gattttgtgttttttaatggacaagatgtctatgacaacaatgatggaaatgacttcagt
ataacagtggaaggtggtatgcaaatcattgactttgaaaatttcttgcttgaggagaaa
cggagagagcaggagaaacttgctaaagaagaagctgaaagagaaagactagcagaagaa
caaagacgaatagaagcagagaaagctgaaattgaagctgacagagcacaagcaaaggac
gagactgcaaagaaaaagaaagtattgcaagaattgatggcaaaggccacaaagactcgt
gatatcacctggtacatagagccaagtgaatttaaatgcgaggacaaggtcaggttatac
tataacaaaagttcaggtccactctcccatgctaaggacctgtggatccacggaggatat
aacaattggaaggatggtttgtctattgtcaaaaagcttgttaaatctgagagaatagat
ggtgattggtggtatacagaggttgttattcctgatcaggcacttgtcttggattgggtt
tttgctgatggtccacccaagcatgccattgcttatgataacaatcaccgccaagacttc
catgccattgtccccaagcactttccggaggaattatattgggttgaggaagaacatcag
atctttaagacacttcaggaggagagaaggcttagagaagccgctatgcgtgctaaggct
gaaaaaacagcacttctgaaagctaaaacaaaggaaagaactatgaaatcatttttactg
tctcagaagcatgtagtatatactgagcctcttgatatccaagctggaagtagcgtcaca
gtttactataatcctgccaatacagtacttagtggtaaacctgaaatttggttcagatgt
tcatttaatcgctggacacaccgcctgggtccattgccacctcagaaaatgttgcctgct
gaaaatggcacccatgtcaaagcaactgtcaaggttccattggatgcatatatgatggat
tttgtattttccgagagagaagatggtggtatttttgacaataagagcggaatggactat
cacatacccgtgtttggaggagtcgctaaagaacctccgatgcatattgtccatattgct
gtcgaaatggcaccaattgcaaaggtgggaggccttggtgatgttgttactagtctttcc
cgtgctgttcaagatttaaaccataatgtggatattatcttacctaagtatgactgtttg
aagatgaataatgtgaaggactttcggtttcacaaaagctacttttggggtgggactgaa
ataaaagtatggtttggaaaggtggaaggactctcggtctattttttggagcctcaaaac
gggttattttggaaagggtgcgtatatggttgtagcaatgacggtgaacgatttggtttc
ttctgtcacgcggctttggagttccttctgcaaggtggatttagtccggatatcattcat
tgccatgattggtctagtgctcctgttgcttggctctttaaggaacaatatacacactat
ggtctaagcaaatctcgtatagtcttcacgatacataatcttgaatttggggcagatctc
attgggagagcaatgactcatgcagacaaagctacaacagtttcaccaacttactcacag
gaggtgtctggaaaccctgtaattgcgcctcaccttcacaagttccatggtatagtgaat
gggattgacccagatatttgggatcctttaaatgataagttcattccgattccgtacacc
tcggaaaatgttgttgaaggcaaaacagcagccaaggaagctttgcagcaaaaacttgga
ttgaaacaggatgaccttcctttggttggaattatcacccgcttaactcaccagaaggga
atccacctcattaaacatgcaatttggcgtaccttggaacggaacggacaggtagtcttg
cttggttctgctcctgatcctaggatacaaaacgattttgttaatttggcaaatcaattg
cactccacatataatgaccgcgcacgactctgtctaacatatgacgagccactttctcac
ctgatatatgctggtgctgatttcattctagttccttcaatatttgagccatgtggacta
acacaacttactgctatgagatatggttcaattccagtcgtgcgtaaaactggaggactt
tatgatactgtatttgatgttgaccatgacaaaaagagagcacaacagtgtggtcttgga
ccaaatggattcagctttgatggagcagatgctgccggagttgattatgctctgaataga
gctctctctgcttggtacgatggtcgagattggttcaactctttatgcaagcaggttatg
gaacaagattggtcttggaaccgacctgctcttgattatttggagctttaccatgctgct
agaaagttaacgtag
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