Solanum pennellii: 107010959
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Entry
107010959 CDS
T04130
Name
(RefSeq) nijmegen breakage syndrome 1 protein isoform X1
KO
K10867
nibrin
Organism
spen
Solanum pennellii
Pathway
spen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107010959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107010959
03400 DNA repair and recombination proteins [BR:
spen03400
]
107010959
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
107010959
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
107010959
BRCA1-C complex
107010959
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
107010959
NCBI-ProteinID:
XP_015065721
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Position
2:complement(49177791..49189761)
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AA seq
569 aa
AA seq
DB search
MVWGLFPIDPLPGEDSYYFFNKGTYKVGRKGCDVIVNKDKGVSRIHAEILVDEMISLDQS
KKPSTILSKVRVRDCSKYGTFLNKNLDSKEKVHEFPNKETMLKDGDLVSFGTGNATYRFS
YVSFIFFICSPKHSKTNQLITKKVSSIGASITKKWSLDCSHVLVDDSFPLSDDLIDAIVA
RKPLVQYSWVELITGKNICTDIPSHSSCAVLPSHAPKLMLEGVSVQVVDPQSRECCLKGY
AFLLEPENKYKFEGRLQSLLEVGGANISSSEMVSEKNGNDRVVCVVPAGSNNLKSFSNQS
SLPWVSEIDLVSAVLSGYLDPILITSPPVLITSSCSTDETVVADSDAETESTKSDHIAAA
FCSIESSEHDSKGTTSIHKLESVEYHNEDKCTVQIVMPRAKVSMRDTSPSSTKHIKHDGG
HITHDDATIHDREGGYIRRLGVKSDNTVVKEDITDQRENGKLDIIYSQDLIVRDSIMSLP
VSSSSNGGVANFKRFRKANAPSQNSFAIFIPFSKHPYQESECKNEDVAESIREEKKRKQM
EAIAEDLFKSEKGKKSGVAGSLHGLFARR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggcctttttcctattgatcctcttccaggtgaagatagttactatttcttc
aacaaaggtacatataaagtgggtcgaaaaggatgtgatgtcattgtcaacaaggataaa
ggagtttcaaggatacatgcagaaattttagtagatgagatgatttctttggatcagtcg
aagaaaccctcaactattctgtctaaagtacgtgtaagagactgctcaaagtatggcaca
ttcctcaacaagaatctggattcgaaggagaaagttcacgagtttccaaataaagaaacg
atgctcaaggatggcgatctagtttcatttggaactggtaatgcaacttacagattctct
tacgtatcattcatatttttcatttgctccccgaagcattcaaaaacaaatcaacttatt
acaaagaaggtttcatcaataggtgcaagtataactaagaagtggagtttggattgctca
catgtgcttgtagatgactcctttcctctgagtgatgacctgattgatgctattgtcgct
agaaaacccttggttcaatatagctgggtcgagctaattacaggaaaaaatatttgcacc
gatattccaagccacagttcttgtgccgtgttacccagtcatgcaccaaagttgatgctg
gaaggagtttccgtgcaagtggtagatcctcagtcccgtgagtgttgtttgaaaggatat
gcttttttgctggaaccagaaaacaagtataaatttgagggcaggttgcagtccttactg
gaagttgggggtgccaacatttcttcttctgaaatggtctcggagaaaaatggaaatgac
cgtgtggtatgtgtagttccagcaggatcaaacaacttgaagtctttttctaaccaaagt
tccttgccttgggtgagtgaaatagatctggtttctgcggttctatccggatatctggat
cctattcttatcacatccccaccggtgctcattacctcgtcatgctccacagatgagaca
gtggttgcagactcagatgccgaaacagaaagtacaaaatcagatcacatcgctgctgct
ttctgttcaatagaatcttctgagcatgacagcaagggaacaacttctatacataagtta
gaatctgttgaatatcacaacgaagataagtgtactgttcaaatagtgatgcctagggct
aaggtatccatgagggacacatctcccagttcaacaaaacatattaaacacgatggaggt
cacataacacatgatgatgctaccatccatgaccgcgaaggtggttacatcaggcgccta
ggtgtcaaaagtgataatacagtggtaaaagaagatatcacggatcagcgggaaaatggg
aagttggatatcatatatagccaagatttaattgttagagattctatcatgtcattacca
gtctcttcttcatcaaatggcggagttgcaaattttaagcgcttccgtaaggcaaatgct
ccatcccagaatagctttgcaatcttcattccattctcgaagcatccataccaagaatct
gagtgtaagaatgaggatgttgctgaatctattagagaagagaaaaaaagaaaacagatg
gaagcaattgccgaggacctgtttaaaagtgaaaaggggaaaaaaagtggtgttgctggt
tccttgcatgggttgtttgctcgtagataa
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