Solanum pennellii: 107010974
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Entry
107010974 CDS
T04130
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
spen
Solanum pennellii
Pathway
spen03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107010974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107010974
Enzymes [BR:
spen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107010974
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
107010974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
divDNApol
DUF5321
Motif
Other DBs
NCBI-GeneID:
107010974
NCBI-ProteinID:
XP_015065743
LinkDB
All DBs
Position
2:complement(58637200..58649945)
Genome browser
AA seq
1561 aa
AA seq
DB search
MSDEQQPTVEGRRSSRKTSGGKRAEALERIKALRTGGRRSTENGGLQVKIDEPIYDVVED
DEYNDIVAKRREAARGFIVDDDGLGYGDEGQEEDWSVAGVLSSEGSEDENERPKNKKKAS
EKKQQITKKPSAALTAAAALMGKQRISSLFTSSVFKRDDKTRNLSCDSIVDDVIAEFAPD
EADRERRRRGNSNSLQASRSSVANPNLLNVKTEKLGAGKVDLMTRQEVKRVTAHNGESIS
GGLPEISTDEGTGGLPKISTGEGNNSARDIQSSEVLDAEVEGEKAVKSDNLSTVGIRDGD
TVVNCAEVKLEPLVESKVFALNAKISEGKDPGLSATAEWQALRNAGSGILNCNEPEAKLV
NTEEKTDFELDSDGSLPFFILDAHEELYGTNAGNIYLFGKVKAGGTYHSCCIVVKNMQRC
VYAVPNGSVFCGDTISKLSRDVEESQISPPAFLSQLHEMASGLKAECRNYLLEHNISSFS
MAPVKRNYAFERSDVPRGENFVLKINYPFKDPPLPSDLRGENFSALLGTHSSAMELFLIK
RKIKGPSWLSISKFSSCPIPQRVSWCKFEVIVDSPKDIKISTSSKNVAEIPPVVVTAINL
KTIINQKQNINEIVSASVICCHSAKIDAPMLTSEWTKPGMLSHFTVVRKLEGGIFPMGFT
KEAAERNTKAGSNVISFESSERALLNRLMIELHKLDSDVLIGHNISGFDLDVLLHRVQAC
KVPSSMWSKIGRLKRSVMPKLTKGSTLFGSGASPGIMSCISGRLLCDTYLSSRELLKEVS
YSLTQLVKNQLNKDRKEISPHDVPQMFQAADSLLELIECGETDAWLSMELMFHLSVLPLT
RQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKFIVPDKFSSHAREAKITKRKLNQGN
EGKETEPIDADDPNIEGGILDINHGKAKKGPSYSGGLVLEPKRGLYDKYILLLDFNSLYP
SIIQEYNICFTTVESSLDGSVPHLPSSKRTGLLPELLKNLVERRRMVKSWLKTASGLKAQ
QFDIQQQALKLTANSMYGCLGFSNSRFYAKSLAELITSQGREILQSTVDLVQNLLNLEVI
YGDTDSIMIYSGLDDIGKSKAIAAKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVK
VQFKDGKPYEVIEKKGLDMVRRDWSLLSKELGDFCLSQILSGGSCEDVIESIHNALMKVQ
EQMRTGQIELEKYVITKSLTKPPEAYPDAKSQPHVEVALRLKKSGYVTGCFAGDTVPYVI
CCEQGNGSTTSVGIAQRARHPDELKRDNGNWIVDIDYYLAQQIHPVISRLCASIQGTSPA
RLADCLGLDSSKFQSKSSEAVNDDPSNALLCVADDEERFRGCEPLTLTCPSCSCSFECAP
IFSSICLSIRQNPADLQVGESASKVWERFSCPKCPEESEGNISSALIANQVKRQVEGFIS
TYYKGVMMCDDETCNYTTRSLNLRVIGDSERGTVCPNYPRCNGHLLRQYTEADLYKQLAY
FCFVLDTVRCIEKVESNMRLQVEKELVRIRPVVEAAASTVEKFRDRCAYSWVQLKNLIVS
F
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaacaacaaccaacagtcgaaggaaggcgctctagcaggaaaacaagcggc
ggtaagagagcagaggcgctcgagcggatcaaagctctccggactggtggccgtcgttcc
actgagaacggcggattacaggtcaagatagatgaaccaatttacgatgtagttgaggac
gatgagtacaatgacatagtcgctaagcgccgtgaagcagctcgggggtttattgttgat
gacgatggtttagggtatggagatgaaggccaggaagaggattggtcagttgccggcgtg
ttatcgtcggaaggatcggaagatgagaatgagagaccgaagaataagaagaaggcatcg
gagaagaagcagcaaattactaaaaagccatcagctgcgctaacagctgctgcggcattg
atgggtaagcaaagaatttctagtctgtttacctcttcggtgtttaagagagacgataag
actaggaatttgtcgtgcgatagcattgtagatgatgttatagctgaattcgctcccgat
gaggctgatcgggagagaaggcgaagaggaaattctaactcattgcaggcttcgaggagt
tcagttgctaatcccaacttgctcaatgttaaaactgagaagcttggagctggcaaggtt
gatttgatgactagacaggaagtgaaacgtgttactgctcataatggggagtctatttca
ggtggcttacctgaaattagtacagatgaaggaacaggtggcttacctaaaattagtacg
ggtgaaggaaacaattcggctagagatattcaaagtagtgaggttttagatgctgaagta
gaaggggagaaagcagtaaaatcagataatttgtctacagtgggaataagggatggtgac
actgtagtaaattgcgctgaagtgaagttggagcccttggtggaaagtaaagtatttgca
cttaatgctaaaatcagcgagggaaaggatccaggcttgagtgctactgctgaatggcag
gctttaagaaatgcaggtagcgggatcttgaactgcaatgaacctgaggcgaaacttgta
aacactgaagagaaaacagattttgagttggattctgacggatcattgcctttcttcata
cttgatgcccatgaagagctgtatggtacaaatgctggcaatatttatctttttgggaag
gtgaaagctggaggtacataccatagttgctgtattgttgtgaagaacatgcaaagatgt
gtttatgcggtccctaatggttctgtattttgtggtgatacaatctccaagctctccaga
gatgtagaagagtctcaaatctctcctcctgccttcctcagtcagttgcacgagatggca
tcaggattgaaggctgagtgtagaaattaccttctagaacataacatctcgagttttagc
atggcaccagtgaagagaaattatgcatttgaacgatctgatgtacctcgaggggagaat
ttcgtccttaagattaactatcctttcaaggatccaccgcttccatcagatctcagggga
gaaaactttagtgccttgcttggtactcattccagtgcaatggagctattcctgatcaag
aggaaaattaaaggaccttcatggctatcaatttcgaagttctctagttgtcctattcct
caacgtgtgagctggtgtaaatttgaggtcattgtagatagtccaaaagacattaaaatc
tccacatcctcgaagaacgttgctgagattcctccagtggttgttacagcaataaatctg
aaaactatcatcaaccaaaagcaaaatataaatgaaattgtatctgcatctgtcatttgc
tgtcacagtgcaaagattgatgcgcccatgttaacctccgaatggacaaaaccagggatg
ctttctcattttactgttgtgcgtaagcttgagggaggcatatttcctatgggatttact
aaggaagcagcagagagaaatacaaaagctggatcaaatgttatcagttttgagagcagt
gaaagggcattattaaaccggttgatgatcgagttgcataaattggacagtgacgtgctt
attggccataatatttctggctttgacttggatgttcttcttcatagagttcaggcctgc
aaagtccccagcagtatgtggtcaaaaataggtcgccttaaacgctctgtcatgccaaag
cttaccaagggcagtacactttttggctcaggagcaagtccggggatcatgtcttgtatt
tctgggcgtcttctatgtgatacctatttatcttctcgtgaattattaaaagaggttagt
tattcattgacacaacttgtgaagaatcaactgaacaaagataggaaggagatttctccc
cacgatgtgcctcaaatgtttcaggctgctgactcactcttggaacttattgaatgtgga
gaaactgatgcatggttatcgatggaactcatgtttcatctaagtgttcttcctttgact
cgtcagctgaccaatatcagtggtaacctttggggaaaaacccttcagggtgctcgggcc
caaagagtagaatacctcttattgcatgcattccatgctaagaaattcatagtgccagac
aaattttcttctcatgcaagagaagctaaaattacaaaaagaaagttgaaccagggtaat
gagggaaaagaaactgagcccattgatgctgatgatccaaatattgaaggtgggattctg
gacatcaaccatgggaaagcaaaaaaggggccttcctactctggtggattagttttggag
ccaaaaagaggtttatacgataagtacattctgctactggacttcaacagtctataccct
tccattattcaggaatacaatatttgtttcacgacagttgaaagctctctggatggatca
gttcctcatttaccatctagtaaaagaacggggcttttaccagagttgctcaagaatttg
gttgagaggagaagaatggtcaagtcatggttaaaaacagcatctggtctcaaggcccaa
cagtttgacatacagcaacaagctctgaagcttacagcaaacagtatgtacggatgtcta
ggattctccaattcaagattctatgcaaagtcgctagcagagcttataacctcacaagga
agggaaattttacagagtactgttgacctagttcagaatttactcaacctggaggttatc
tatggtgacactgattcaattatgatttatagtggacttgatgacattggaaaatccaaa
gcaatagctgccaaagttattcaagaggttaacaagaaatacaggtgcttagagattgat
cttgatggtctgtacaaaagaatgctgcttctcaagaaaaagaaatatgcagctgtaaaa
gtgcagtttaaggacggaaagccctatgaggttattgagaaaaaaggtctcgatatggtg
cgtcgtgactggagcttgctgtcaaaggaattgggagatttctgccttagccaaatactg
tccggcgggtcctgtgaagatgtcattgaatcaatacataatgcacttatgaaggtacaa
gagcaaatgaggactggccaaattgagctggaaaaatacgtgatcaccaaatcattgact
aaacctcctgaagcctatcctgatgctaaaagtcaacctcacgttgaagtagcactcagg
ttgaagaaaagtggctatgttactggttgctttgctggtgatacagtaccatatgttatc
tgttgtgaacagggtaatggttcaactacctctgtgggaattgctcagcgggcaagacat
cctgatgaactgaaaagagacaatggaaactggatagtagacattgattattaccttgcc
caacagatacatcctgtaatatcccgtctatgtgcgtcaattcagggtactagcccagca
cgtctggctgattgcttaggactagattcatccaagttccaaagtaaatcaagtgaagct
gtcaatgatgatccctcaaatgcacttttatgtgtagctgatgatgaagagagatttcgg
ggttgtgagcctttgactttgacatgccccagctgctcctgctcttttgagtgtgcacct
atatttagttccatatgtttatcaattaggcaaaatccagcagacttgcaagtaggagag
tctgccagcaaagtctgggaaagatttagttgtcccaaatgcccagaggagagtgagggg
aatatatcttcggcattgatagcaaaccaggttaaaaggcaagtagaaggctttatttca
acatactacaaaggagttatgatgtgcgatgatgaaacctgcaactacaccactcgtagc
ctgaacctgcgagtaattggggactcagagagaggaactgtttgtccaaattatcctcgt
tgtaatggacacttactaagacagtacacggaagcagatctttacaaacagcttgcttat
ttctgcttcgtcttagacactgtacgctgcattgagaaggttgagagtaacatgagatta
caagtagagaaggagcttgttaggatacggcctgtggttgaagcagcagcatcaactgta
gagaagttccgtgatagatgtgcctacagttgggtgcagcttaaaaatttgattgtttca
ttctag
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