Solanum pennellii: 107011027
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Entry
107011027 CDS
T04130
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa isoform X1
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107011027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107011027
Spliceosome [BR:
spen03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
107011027
Complex B
107011027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
107011027
NCBI-ProteinID:
XP_015065828
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Position
2:complement(52293609..52299613)
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AA seq
477 aa
AA seq
DB search
MGDFNDAFMRNNPNVQARAKAQNRANVMQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPP
PEKRKCPSYTGMAQFVSNFAQPGDPEYAPPIPEVETPTERRARIHKIRLEEGAKKAAEEL
EKYDPGSDPNATGDPYKTLFVARLNYETTESRVKREFEAYGPIKRVRLVMDKTNNKPRGY
AFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGNEDA
TREVVQPGRAASRSEEPRARDDRDSRDREKSRERVRDKDREKSRERSHDRPRERERDDKH
HRERERTREREKDRGRDRDRDRERDRTRDRERGKDRDRDGHRERDRHREKDRERGRDEGE
VDQGRGRSRDREYDYEHVDSKHERDRHGDKERNYDPAEPEDDHGHYDYYDHHQSRGDYEN
PDAQGGDDRYKDASRGHDRYDQMEEDNYAYDHGASETKERDRDYKRSDRSHSREYDY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaag
gcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactggg
ttgactgctaatcttctgaagctgtttgagccccgaccacctttggagtacaaaccaccc
cctgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgct
caacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacga
agagctaggatccacaagatacggctggaggagggtgctaaaaaggctgctgaggagctt
gaaaaatatgatcctggcagcgacccaaatgctaccggggatccatacaagacactattt
gttgcaagacttaattatgagacaacagaaagccgagtcaaacgcgaatttgaggcttac
ggtccaatcaagcgggttcgcttggttatggacaagacaaacaataaacccaggggttat
gctttcattgagtatgtgcatacacgggatatgaaagctgcatataaacaagctgatgga
aagaagattgataatagaagagtgctggttgatgttgaacgtggtagaacagtccccaat
tggcgtccccgcagacttggtggtggacttggaacaacaagagttggaaatgaagatgct
actagagaggtggttcagcctggaagggcagcatctcgctctgaggagccaagagcacga
gatgacagggatagcagggatcgggagaagtcccgtgaaagggtgcgagataaggacaga
gagaaatctcgtgagcgttctcatgacagaccaagggaacgtgaaagagatgacaaacat
catagggaacgcgagagaaccagagaaagggaaaaagatcgtggtcgtgaccgtgatcga
gaccgcgaacgtgataggacacgtgaccgtgagcgaggcaaagacagagaccgggatggt
caccgtgagcgagatcgtcaccgtgagaaggacagggaaagaggtagggatgaaggtgag
gttgaccagggtcgtgggcgttctcgtgatagagaatatgattatgagcatgttgattca
aaacacgagcgagaccgacacggtgacaaagagaggaattatgatcctgcagaacctgaa
gatgatcatggacattatgactattatgatcaccaccaaagtcgaggagactatgagaat
ccagatgcacaaggtggggatgatcgctataaagatgccagtcgtggtcatgatcgttat
gatcaaatggaagaggataattatgcttatgaccacggggcatctgagacaaaagaaagg
gaccgggattacaagcgttcagataggtcacattctcgtgaatatgactactga
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