Solanum pennellii: 107011055
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Entry
107011055 CDS
T04130
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
spen
Solanum pennellii
Pathway
spen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107011055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107011055
Membrane trafficking [BR:
spen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107011055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
107011055
NCBI-ProteinID:
XP_015065858
LinkDB
All DBs
Position
2:49692336..49704697
Genome browser
AA seq
1050 aa
AA seq
DB search
MGTEYPNRPTFPSRPAATPFGVPQSTTPFQSSRPVVGSDASAFRPAPPTSSPAMPPPSSS
GPMVGPGISSFRPMPPGMPNDAGRPPPTSTPPYGPTVSGPFPRFPSPQFPSTAQVPPPRT
AMPGQPVVAAPVRPVSGPFSTPPGAHHPQIQPPTVPMGSPPQGASTVQPSPNVHQGPMQS
QFSAARATSQPSSPLAGSAYPAARPGFQSGFPGYISQQPSGFAQAPPRQSVPFPSQPGGY
VPPVPAASSPYLSQQGGFAPPPPLTSQRPGSMPPTSAMQGLVEDFSSFSIGSVPGSFDSG
LDSKVLPRPIDVDLERNVLSEMYPMNCSSRFLRLTTSGIPNSQSLASRWHLSLGAVVCPL
AEAPDGEEVPVVNFAPTGIIRCRRCRTYVNPYVTFTDSGRKWRCNICALLNEVPGEYFAH
LDASGRRVDLDQRPELTKGSVEFIAPAEYMVRPPMPPLYFFLIDVSLTAVRSGMLEVLAQ
TIKNSLDSLPGFPRTQIGFITYDSTVHFYNMKSSLTQPQMMVMSDLEDVFVPLPDDLLVN
LSESRTVVDAFLDSLPSMFQDNVNVESAFGPALKTAFMVMNQLGGKLLIFQSSLPSLGVG
RLKLRGDDVRVYGTDKEHTIRVPEDPFYKQMAADFTKYQIAVNLYAFSDKYTDIATIGTL
AKYTGGQVYYYPSFQASVHKDRLRHELTRDLTRETAWESVMRIRCGKGVRFTTYHGNFML
RSTDLIALPAVDCDKAYAMQLSLEETLLTSQTVFFQIALLYTSSSGERRIRVHTAAAPVV
SDLGEMYRLADTGAIISLFTRLAIEKTLTSKLEEARNSIQLRIVKALREYRNLHAVQHRV
AGRMIYPESLKYLPLYGLALCKTTALRGGYADAQLDERCAAGYTMMALPVKRLLKLLYPK
LIRIDEYLLKKPSSPEESKDILKGVPLTTESLDPQGLYLFDDGFRFVIWFGRMLSPNMIQ
SLLGENFAADFSKVSLQELDNEMSRELMGLLKRERESDRSYYQLYHLVRQGEQPREGFFL
LANLIEDPVGGSIGYQDWILQVHRQVQQNA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgaatatcccaatcggccaacctttccctcaaggcctgctgctacacctttt
ggtgttccgcagagtacaactccttttcaatcatctcgtccagtggttggatctgatgct
tctgcttttcggcctgctcctcctacttcttctccggctatgccacctccttcctcatct
ggacccatggttggaccagggatctcttcttttagaccgatgccacccgggatgcctaat
gatgcagggaggccacctccaacatcaacacctccatatgggccgacagtctctggccct
ttcccacgtttcccctcaccgcagtttccttctacagctcaggtaccacctccacgcact
gcgatgccggggcagcctgttgtagcagccccagttagacctgtttcagggcctttctca
acacctcctggtgcccatcatccacaaatccaacctcctactgttccgatgggatctcct
cctcaaggtgcaagtacagtgcagcctagtccaaatgttcatcagggtcccatgcagtcc
cagttttctgctgccagagcaacctcacagccatcttcccctttagcaggttcagcttat
cctgctgctagacctggctttcaatctggttttccaggatatataagtcagcaaccttca
gggtttgcacaagctccccctagacaatcagtaccatttccttctcagcctggcggctat
gttccaccagtgccagcagcttctagcccctatctttctcaacaaggagggtttgcacca
ccaccacctctaacatctcaacgtccaggatctatgcctcctacatctgctatgcaaggt
ttggtggaagacttcagttccttctcaattgggtctgttccaggatcatttgattccggc
cttgactctaaggttctaccaagaccaattgatgttgatcttgagcggaatgttttgtct
gagatgtatcccatgaactgcagttcaagatttttgaggctcacaactagtggcatacca
aattctcagtctttggcttcaaggtggcacttatctcttggagcagttgtttgtcctctc
gccgaggcacctgatggggaagaagttcctgtggttaattttgccccaactggtatcatc
cgctgtagaaggtgtcgcacttacgtaaatccttatgtgacattcaccgacagtggaaga
aagtggagatgtaatatatgtgcattgcttaatgaagttcctggtgaatatttcgcacat
ttggatgccagtggcagaagagttgacttggatcaaaggcctgaacttaccaaaggtagc
gtggagtttattgctccagctgagtacatggtccggcctccgatgcctcccctgtacttt
tttctcattgatgtatctttgactgctgtgagaagtggaatgcttgaggttttagcacaa
accatcaagaacagtttggacagcttgcctggatttccaagaacacagatcgggtttata
acatatgacagtacagtacacttttataacatgaagtcatccttgactcaacctcaaatg
atggtcatgtcagatcttgaagatgtatttgtgccattgccagatgatcttcttgtcaac
ttgtcagaatcaagaactgtggtagatgcatttctagacagccttccttcaatgtttcag
gataatgtgaatgtggaatcagcttttggtccagctcttaaaacagccttcatggttatg
aaccaacttggcggtaaattgctgatctttcaaagcagtcttccatcacttggtgttggt
cgcttaaaattacgaggagatgatgttcgtgtatatggaactgataaagagcatacaata
agagtacctgaagatcctttttataaacaaatggctgctgatttcaccaagtatcagata
gcagtcaatttatatgctttcagcgacaaatatactgacatagctactatagggacgctg
gcaaagtacacaggtggtcaggtgtactactatccaagttttcaagcttccgttcacaaa
gatagattgcgtcacgagttaacccgagatcttacaagggagactgcttgggagtctgtc
atgcgcataagatgtggaaaaggtgttcgttttacaacatatcatgggaacttcatgctg
agatccactgatctgatagcacttcctgctgttgactgtgataaagcatatgcaatgcag
ttatcccttgaagaaacactactcacttcgcagacagtatttttccaaattgctctacta
tacacatcatcttctggagaaaggcgcattagagtacacacagcagcagcaccggttgtt
tcagatttaggagaaatgtatcgcctagctgatactggtgctatcatttctctttttacc
aggcttgccattgagaaaactctgacctctaaattagaggaggctcgaaattctattcaa
ctcaggattgtgaaagctcttagagaatatcgaaatctccatgctgttcagcaccgtgtg
gctggaaggatgatatatccagaatctttaaagtacttgccattatatggattagcttta
tgcaaaacaactgcccttcgtggtggatatgctgatgctcagcttgacgaacgatgtgct
gctggatataccatgatggctttgcccgttaaaagattgttgaagcttctatatcctaag
ttgatccgtatagatgaatatcttctaaaaaaaccatcttcgccagaggagtctaaagac
atcttgaaaggggttccacttacaacagagagcttagatccccagggtctctatctcttt
gatgatggtttccggtttgtcatctggttcggtagaatgctttctcctaatatgatccag
agtttgctcggagaaaactttgctgctgacttctctaaggtttcacttcaagagctagat
aatgaaatgtcaagagaactgatgggtttgcttaaaagagagagggagagtgacagatca
tattatcagttataccatcttgtgaggcaaggtgaacagcctagagaaggcttcttcttg
cttgcaaatctgattgaggatccagttggtggttctattggttaccaggattggattctg
caagtacaccgacaagtccagcaaaatgcataa
DBGET
integrated database retrieval system
