Solanum pennellii: 107011061
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Entry
107011061 CDS
T04130
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107011061
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
107011061
REST complex
107011061
Heterochromatin formation proteins
Other heterochromatin formation proteins
107011061
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
107011061
NCBI-ProteinID:
XP_015065867
UniProt:
A0ABM1G4G6
LinkDB
All DBs
Position
2:complement(53929170..53938134)
Genome browser
AA seq
1347 aa
AA seq
DB search
MKRLRDDGYDSPSFKRPFGSNRGESYSPSQVPGSGQGGVGGGSSAGGASASNSKLTTGDA
LSYLKEVKDMFQSQRDKYDMFLDVMKDFKAQRIDTVGVIARVKDLFKGHPRLILGFNTFL
PKGYEITLNDEDEAPPKKVEFEEAISFVNKIKTRFQNDDHVYKSFLDILNMYRKEHKGID
EVYREVAVLFSDHPDLLDEFTRFLPDNSGTASAAQTSVGRPSFHRYDERSSAMPILRQSH
MDKRFRRDRIIGPYAERDLSIERPDLDDEKTMMKLHKEQKRRTEKESRDRRTHDQDYKEP
DNENNEDLSIQRHTDKKKSARKVEEFGGPHEDKDALKNMYSQEFSFCEKVKERLRSPTDY
QAFLKCLHIYSTEIITRTELQSLVADLLGKHPDLLEGFGEFLERCEQDDGFLEGFMRKSR
WNDGHASKSAKDDGKEKEPKRETDGTKEKDRYKEKYSGKSIQELDLSNCKRCTPSYRLLP
DDYPIPTASQKSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDML
LESVSSTAKRVEELLNAINDNSIGGAFRVEDHFTVLNLRCIERIYGDHGLDTVDILRKNP
SHALPVILTRLKQKQEEWTKCRTDFNKVWSEIYAKNHYKSLDHRSFYFKQQDSKNLGSKS
LLAEIKEIKENKQKEDDMILSISAGSRYSITPNLEFDYTDSELHEDLYKLIKYSCEEVCS
SKEQLDKVLGLWTNFVEQILGVPCRPRDSEATENDVLLKPHGPKVDGASIGESDGSPSAD
ATTRNCKQSKVISNRDANASPLRVNPSRTSFASADALPKEDGLPVTGEHLTISDAAPAMG
ADTVHGRVELTSGRAARQGNGASDDGQVSKSNIDNVPASESDTSRSIPLGNGGFAEGSTM
NGYNDDSADPCKNEKEEGELSPNGDFEEDNFVAFRSGASHNESVQYQTRGAEEIGSQDAA
GENDADADDEDSENVSEAEEDVSGSESAADECSREEHEEEDDGEHDELDGKAESEGEAEG
TNEAHYAGGDGNVLQMSDRVLLTSKPLTKYAASPVCEGVVKYPRVFYGNETFYVLFRLQQ
ILYERLLSAKMNSASSESKWRTGKDTGSIPYDRFMSALHSLLDGSAENSKFEDDCRSIIG
NQSYVLFTLDKLIYKLVKQLQTVSSDELDCKLLQLYEYERLRKPEKFVDSAYYENAHVLL
QEDSIYRFECMSSPTRLSIQLMDDRSDKSEVVAVAVDPNFAGYLHNDYLSVKHGKKESSA
VLLKRNKRKRADDDESTALCMAMEHVILVNGLECKMASNSSKISYVLDTEDFFFRQGGKR
RKVSSGRLSCLYQARVERFHRVLLSSL
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattgagagatgatgggtatgatagcccttcatttaagcggccatttggctcc
aacagaggagaatcctacagtccatcacaagttccaggaagtggtcagggtggagttggt
ggtggcagcagtgctggtggagctagtgctagtaattcaaagctgacaactggtgatgca
ttgtcttatttgaaggaagtcaaggacatgtttcaaagccaaagggataagtatgacatg
ttccttgatgttatgaaagactttaaagctcaaagaattgatactgttggtgtcatagct
agagtaaaagacttgtttaaagggcatcctaggttgatccttggattcaacaccttcttg
cccaagggttatgaaataaccctcaatgatgaagatgaggctcctccaaagaaagttgag
tttgaagaagctattagctttgttaacaaaataaagacccgtttccaaaatgatgatcac
gtttacaaatccttcctagatattttgaacatgtataggaaggaacacaagggaatcgat
gaggtgtaccgtgaggttgccgtactttttagtgaccatccagatttgctagatgagttc
actaggttcttgccagataattcaggaactgcatcagcagcacaaacttcagttggcagg
ccttcattccatcgctatgatgagaggagctcagctatgcccattctcaggcaatcgcac
atggacaagcgcttccgtcgggataggattattggtccttacgctgaaagagaccttagc
attgagcggcctgatttggacgacgaaaaaacaatgatgaagttgcataaagagcaaaag
agacgtactgaaaaagagagcagggacagaagaactcatgatcaggattataaagaacct
gataatgagaataatgaagatctaagcatacagcgccacactgataaaaagaaatctgct
cggaaggttgaagaatttggaggacctcatgaagataaagatgccctgaaaaatatgtat
agccaagagttcagcttctgcgaaaaggtcaaggaaagactacgaagtcctactgattat
caggctttcttaaaatgtcttcacatttatagtacagaaataattacaaggaccgagtta
caaagtttggttgctgatctgcttggaaaacatcctgatcttttggaaggtttcggtgaa
tttctagagcgttgtgagcaagatgatggatttcttgaaggttttatgaggaagagtaga
tggaatgacgggcatgcttccaagtcagcaaaggacgatgggaaagagaaagagcctaag
cgtgagactgatggaactaaagaaaaggacagatacaaggagaaatactcgggaaaatcc
atccaagaacttgacctctcaaactgcaaacgctgcacacccagttatcggcttctccct
gatgattatccaatacctacagcaagccaaaaatcagagcttggagctcaggtgttaaat
gaccattgggtttctgtgacttcagggagtgaggattactcgtttaagcacatgcgcagg
aatcagtatgaagaaagcctgttccgttgtgaagatgataggtttgagctagacatgtta
ttggagtcggtgagttcaactgctaagcgcgtagaagagttattgaatgccattaacgat
aattcaattggtggggcattccgtgttgaggaccactttacagtcttaaatttaagatgc
attgagcgaatctatggtgatcatggtctggatacggtggatattctgcgtaaaaatcca
tctcatgcgctgcctgttatactgacccgcttgaagcagaaacaggaggagtggaccaag
tgtcgcactgattttaacaaagtttggtcagagatctatgctaagaaccattataagtca
cttgaccatcgaagtttctacttcaagcaacaagactcaaagaatcttggctcaaaatcc
ttactggcggagatcaaagaaataaaggagaacaagcagaaagaagacgacatgattctt
tctatttccgctggaagtagatattctataacaccaaatcttgaatttgattataccgac
tctgagcttcatgaagacttgtacaaacttatcaagtattcatgtgaagaggtttgctcc
tccaaagagcaattagataaagtactgggattatggaccaactttgttgagcaaatcttg
ggtgttccttgtcgtcctcgtgactcagaggctactgagaatgatgtcttattgaagccg
catggcccaaaagttgatggagctagcattggtgaaagtgatggcagtcctagtgcagat
gctactactaggaattgtaaacaatcaaaagttatcagcaacagagatgctaatgcttcc
cccttacgagtaaatccttctaggacaagctttgcaagtgcagatgctctccccaaagaa
gatggtttgccagtgactggtgagcacctaactatttctgatgcagctcctgctatggga
gcagatactgttcatggaagagtggaactaacttcagggcgtgctgcaagacagggtaat
ggtgcttctgacgatggtcaagtatccaagtctaacatcgataatgtgccagcatcggag
agtgatacttcaagatcgattccgttgggtaatggagggtttgcagaaggctctacaatg
aatgggtacaatgatgattcagctgatccctgtaaaaatgagaaagaagagggtgagtta
tcacctaatggtgattttgaagaggacaattttgttgcctttcgaagtggtgcctcgcac
aatgaaagtgtgcaatatcaaaccagaggtgctgaagagattggttctcaggatgctgct
ggtgaaaatgatgcagatgctgatgatgaagatagtgaaaatgtttctgaggctgaagaa
gatgtttctggcagtgagtctgctgctgatgagtgctctcgagaagagcatgaggaagag
gatgacggagagcatgatgaacttgatggtaaagctgagagtgaaggtgaggctgagggg
acgaatgaagcacactatgctggaggtgatggcaatgtgttgcaaatgtccgatcgggtt
ttgcttacttcaaagccacttacaaaatatgcggcttcacctgtatgtgagggagtggtg
aagtacccgcgggtattctatggaaatgagacattctatgtgctttttaggctacagcag
attctatatgaaaggttattatcagcaaagatgaattcagcatcgtccgagtcaaaatgg
agaactggaaaagatactggttctattccgtatgacagattcatgagtgcgctgcatagt
ttgctagatggttctgcagaaaattcaaaattcgaggatgattgccgatcaatcattgga
aatcagtcatatgtgctattcacgttggacaagttgatatataagctggtcaaacagctt
caaacagtctcgagtgatgagctggactgtaagctgcttcagttatatgaatatgaaaga
ttaaggaaacctgagaaatttgttgattcagcttattatgaaaatgctcatgtcctcctc
caggaggacagcatttaccggtttgaatgtatgtcttcgcctacccgtctgtccatccag
ttgatggatgatagaagtgacaagtctgaagtagttgcagttgctgtagatcccaatttt
gcaggttatctgcacaatgattatctgtcagttaaacatgggaaaaaggagtcttctgca
gttctgctgaagagaaataagcggaaacgtgctgacgatgatgaatcaactgctttgtgc
atggcaatggaacatgttatccttgtaaatggtctggaatgcaagatggcttcaaattca
tcgaagatatcatatgtgcttgacacagaggacttctttttccgccagggtggtaaaaga
agaaaagtttcatctggcagattgtcatgtctttaccaggccagagtagaaaggttccat
cgtgttctgttgtcatcattatga
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