Solanum pennellii: 107011093
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Entry
107011093 CDS
T04130
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107011093
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107011093
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
107011093
NCBI-ProteinID:
XP_015065915
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Position
2:complement(40544542..40551649)
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AA seq
555 aa
AA seq
DB search
MAGRRDSYGKRSHSQSDYGENGGNKRRNTRNDKDPFSIGPDDTVYRYLCSVKKIGSIIGK
GGEIVKQLRVDTKSKIRIGETVPDCDERVVTIYSSSEETNEFDGTEVRVCPAQDALFRVY
DKIISDDTTDENSEEASQVTVKLLVPSDQIGCIIGKGGQIVQDIRSETGAQIRILKDKHL
PACALSSDELVQISGEVAVVRKALFEVATRLHNNPSRTQHILASDAPTIYSSRSSLIGSA
GGAPIVGIAPLVGPYGGYKGESGDWSRSFHSAPRDESSSKEFSLRLVCPAANIGGVIGKG
GVIINQIRQESGAVIKVNSSNAEGDNCVISISAKEFFEDTYSPTIEAALRLQPRCREEVE
RDSGLISVTTRLLVPASRIGCLIGKGGSIINEMRKITKANIRILSKEDLPKVASNDDEMV
QISGDPDASKDALMQVTSRLRANLFEKEGPMSAFVPVLPYLPMSTDSDTLKYEHRDTRRQ
GREHSYSAGYGGTSDLPHADGFGSYGTLQSSSSVGYGAYEGYSPAYPKEGYSHGRSSGSG
SSRQNSAPWRKSYGY
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcgacgggatagctatggaaagcggtctcattctcagtcagattatggtgaa
aacgggggaaataaaaggagaaatactagaaatgataaggatcctttctctattggccct
gatgatacagtatatcggtacttgtgttcagtaaagaagattggcagcatcataggtaaa
ggtggggagattgttaaacaattaagggtggatacgaaatcaaaaattagaattggagag
acagtacctgactgtgatgaacgtgttgtcaccatctacagctcaagtgaagaaacaaac
gagtttgatggcactgaagttcgtgtttgtccagctcaggatgcccttttcagagtatat
gataaaattatcagtgatgacactactgatgagaactctgaggaagcatcacaggttact
gttaagcttttagtaccttcagatcagattggatgtattattgggaaagggggacagata
gttcaggacattcgaagtgaaactggtgctcagattcgtattttgaaagataagcatttg
cctgcatgtgcattgagctcagacgaacttgtgcagatatctggtgaagttgctgtagtg
aggaaggctctctttgaagttgcaactcgtcttcacaataatccatcccgtacccaacac
attctagcctccgatgcaccaactatctactcctcgcgcagctcacttattggttctgct
ggtggtgctccaatagtgggaatagctcctttagtggggccatatgggggttacaaaggg
gagagcggtgattggtcaaggtctttccactctgctccaagggatgaatcatcttcaaag
gaattttctcttcgtttagtgtgtcctgctgcaaatatcggaggtgttattggcaaaggt
ggagtcataataaaccaaattagacaagagtctggtgcagtgatcaaggttaatagttct
aatgctgaaggtgacaattgtgtgatttctatttctgcaaaagagttttttgaggacaca
tattctcccacaattgaagcagcactgcgcttgcaaccaaggtgccgtgaggaagtggaa
cgggattcaggtcttatatcagtcaccacaaggttgctggttccagcatctcgaatcggc
tgtcttattgggaaaggaggatccataattaatgagatgaggaaaatcacaaaagctaat
attcgcattctctcgaaggaagatcttccaaaggttgcatctaatgatgatgagatggta
cagatatcaggagatcccgatgcttcaaaggatgcactcatgcaagtaacatcacgttta
agggctaatctttttgaaaaagagggacccatgtctgcctttgtgccagttctcccctac
ctccccatgtcaacagattcagataccttgaaatatgaacacagagatactaggagacag
ggacgtgaacattcctactcagctggttatggtggtactagtgaccttccacatgctgat
ggttttggaagttatggtactctccagagtagtagcagtgtaggatatggggcatatgaa
ggatattcccctgcttatccaaaagaaggatattcccatgggcgttccagtggatccggg
tcatcaaggcaaaactctgccccctggagaaaaagttatggttactag
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