KEGG   Solanum pennellii: 107011096
Entry
107011096         CDS       T04130                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107011096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107011096
Spliceosome [BR:spen03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107011096
 Complex B
    107011096
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 107011096
NCBI-ProteinID: XP_015065920
LinkDB
Position
2:37659535..37670227
AA seq 560 aa
MPDYEANGEDIDNYGSSPLPKSRSSHGGINPDDFTDSKPQHSSREYEKDKSSSRSREKDR
EKGRDRDRDRGRERDKDRDRERDKDRDRHHRDRHRDRSDRRERERTRDRDDDERHRTRDY
DKQRDHDKDRESRHRHRSRSRGRSEHKSRSRSRSRSKSKRISGFDMAPPTTAMLPGATAA
AGQVPGTSPGIPGMLPNMFPLTSGPFGALPVMPIQAMTQQATRHARRVYVGGLPATSNEQ
SVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGA
PCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEA
QIRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR
RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPGALATKVLCLTQVVEVDELSNDEDYQD
ILEDMRTECGKFGSLVNVVIPRPSPDGEHAPGVGKVFLEYGDVESASKARQSLNGRKFGG
NQVIAVFYPENKFYEGDYDG
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgccggattatgaagccaatggagaagacatagacaattacggctcttctccccttccc
aaatccagaagtagccatggcggcattaatcccgatgatttcaccgactccaagcctcag
catagttctcgtgaatatgaaaaagataagagctcgtcaagaagcagggaaaaggatagg
gagaaagggcgtgatagggaccgtgacaggggcagggaaagagacaaagacagggacaga
gagagggacaaggaccgtgatcgtcatcacagagatcgtcatagggatcggagtgacaga
agggagagggagaggaccagagatagagatgatgatgaacgtcatcgaactcgagattat
gacaagcaaagagatcatgacaaagatagagagagtcggcatagacacaggtctcgttca
aggggtagatctgagcataaatcaaggtctcgatctcgttctcgatccaagagcaaaagg
attagtggttttgatatggcacctcctaccactgcaatgttacctggtgctacagctgct
gcaggtcaagtgcccgggaccagcccaggaattcctggaatgttgcccaacatgtttcct
ttaacatcaggcccgtttggagctcttcctgttatgccgatccaggcaatgacacaacag
gctacaaggcatgcccggcgagtttatgtcggtggacttcctgctacttcaaatgaacag
tctgttgcgaccttctttagtcatgttatgtctgcaattggaggaaatacagctggtcca
ggtgatgctgttgtcaatgtctatataaactatgagaagaagtttgcttttgttgaaatg
agatcagtagaggaagctagtaatgccatggcattggatggcatcatatttgagggtgca
ccttgtaaggtcagaagacccagtgattacaacccttctctggctgctactcttggtcct
agccaaccaaacccaaacctcaacctggcagctgttggattgtcaccaggttctgcagga
gggcttgaaggccctgatcgtattttcgttggtggtttgccctactatttcacagaagca
cagattagggagctgttagagtcttttggtgcacttagaggattcgatttggtcaaagat
agagaaacagggaactcaaaaggctatgccttttgtgtctatcaggatgtttccgttact
gatattgcttgtgcagctctcaatgggattaagatgggtgataaaacccttactgttagg
cgtgctaaccagggtacaacacaacctaagcctgagcaagagagtgtattgttgcatgca
caacagcagatagctttgcagagacttatgttacaacctggtgcattagccacaaaggtt
ttgtgtttaacacaagttgttgaggtagatgagctcagtaatgatgaggactatcaagat
attttagaagacatgagaactgaatgtggaaaatttggttcactggtgaatgttgtaatt
ccacgtccaagtcctgatggtgagcatgcaccaggggttggaaaggtatttttggagtat
ggagatgtggagagtgccagcaaagctcggcaaagtttgaatggaagaaaatttggtggc
aaccaagttatagctgtcttctatccagaaaacaagttctatgaaggggactatgatggt
tag

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