Solanum pennellii: 107011114
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Entry
107011114 CDS
T04130
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
spen
Solanum pennellii
Pathway
spen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107011114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107011114
03051 Proteasome [BR:
spen03051
]
107011114
Membrane trafficking [BR:
spen04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107011114
Proteasome [BR:
spen03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107011114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
Ubiquitin_2
Dsc3_N
CSTF2_hinge
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
107011114
NCBI-ProteinID:
XP_015065960
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Position
2:complement(50354881..50362693)
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AA seq
553 aa
AA seq
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MGGGDTSAAAAKEDNENNATGDQKVTINVRCSNGSKFTVQVALDSSVGSFKSTLAQHSDI
PAEQQRLIYKGRILKDEQTLTSYGLEEDHTVHLVRGFAPAAAVNTASAVNTGNPNANQNA
PSDAAPNVGGPFSGSGLGASLFPGLGSGGGLLGAGLPDFEQVQQQLTQNPNMMRDMLNMP
LVQNLMNNPEIIRNMIMNNPQMREIMDRNPELAHVLNDPATLRQTMEAARNPELMREMMR
NTDRAMSNIESSPEGFNMLRRMYENVQEPLLNATTMGGDARSDVGSNPFAALLGAQGTGQ
GRNQSTNPPTTGSEAAANTPAPNTNPLPNPWASAGTGAGQTNTTARSNTAGETRAPPPAG
LGGLALPDLEGMLGGMPDAASLNQMMQNPAVSQMMQSLLSNPQYMNQMLGTNPQLRSMLD
SNSHLREMMQNPEFIRQMTSPETMQQLMTLQQGLLSQLGRQPTNQPGQNVGGAAPDNNMG
MEMLMNMFGGLGSGGLGGVPNRSNVPPEELYATQLAQLQDMGFFDTQENIRALVATAGNV
HAAVERLLGNLGQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggtgatactagtgctgcggcggcaaaagaggataacgagaataacgccacc
ggcgatcaaaaagttacaatcaatgtccgatgttccaacggctccaaatttaccgttcag
gtggctctagactcaagtgttggatccttcaagtccacccttgctcagcactccgacatt
ccagccgagcagcagagattgatctataaaggccggatcttaaaggacgagcaaacccta
acaagctacggtcttgaggaagatcataccgtccatttggttcgaggttttgcaccagct
gccgctgttaatactgcaagtgcagtcaatactggaaatccaaatgctaatcagaatgca
ccctctgatgccgctccaaatgtaggtggaccattttccggatcgggccttggtgcttca
ttgtttcctggtcttggaagtggtggtggtctacttggagctggccttccggatttcgag
caggtccagcagcagttaacccaaaaccccaatatgatgagagacatgctgaatatgcct
ctcgttcagaatttaatgaataacccagaaatcatccgtaacatgattatgaacaatcct
caaatgcgagagatcatggatcgtaatccagagcttgcccacgttcttaatgatcctgct
actcttcgtcagacaatggaggctgcacgaaaccctgaacttatgcgtgagatgatgcgt
aatactgacagggcaatgagcaatattgaatcttcccccgagggatttaacatgctgagg
cgcatgtatgaaaatgtccaagagcctctcctaaatgcaacaactatgggtggagatgca
agaagtgatgtgggttcaaacccgttcgcagctcttttgggggcccagggtacggggcaa
ggcagaaaccagtcaactaatcctccaactactggttctgaggctgctgctaacacacct
gctccaaatactaatccacttcctaatccttgggcttcggctggcactggagctggccaa
actaataccactgctaggtcaaacactgctggggaaaccagggcaccaccgcctgctggc
ttaggtggacttgcactcccagatcttgagggaatgctgggtggcatgccagatgctgct
tcactaaatcagatgatgcaaaacccagccgtctcacagatgatgcagtctctcctctca
aatcctcaatacatgaaccagatgcttgggacgaacccacagctaagaagtatgcttgat
tccaactcccatcttcgagaaatgatgcaaaaccctgaatttattcggcagatgacttcc
cccgagacaatgcagcaacttatgactttgcagcaagggcttttgtctcaacttggtcga
caaccaacgaaccaaccgggtcagaatgtgggaggtgcagcccctgacaacaacatggga
atggaaatgctgatgaatatgtttggtggacttgggtcagggggtttgggtggtgtcccc
aacagatccaatgtgcctccggaggaattatatgcgactcagctagcacagttgcaagat
atgggtttctttgacactcaagaaaatatcagagcattggttgccactgcaggcaatgtt
catgccgcagtagagagacttcttggaaatcttggacagtaa
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