Solanum pennellii: 107011176
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Entry
107011176 CDS
T04130
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107011176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107011176
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107011176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107011176
NCBI-ProteinID:
XP_015066048
LinkDB
All DBs
Position
2:complement(56701873..56710387)
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AA seq
372 aa
AA seq
DB search
MSEKKLVVLGIPWDVDTEGLREYMIKYGDLEDCIVMKERATGRSRGFGYVTFATVEDAKN
ALSKEHFLGNRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVSEATFRGYFEKYGEITD
LYMPKDPSTKGHRGIGFITFANAESVDDLMSDTHELGGSTIVVDRATPKEEDFRPVSRMS
QGGGGYGAYNAYMSATTRYGALGAPTLYDHHSSMYGRGGGGGGGFPSRGGLGQKIFVGRL
PQEATTEDLRQYFGRFGRVLDVYVPKDPRRPGHRGFGFVTFADDGVADRVSRRPHEICGH
QVAIDSATPLDDAGPSNNYMMDPPPPAPEAYGGYGGPMRTYGRMYGGLDYDDWGYGLGGG
RPSRSDMRYRPY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaagaagcttgtggttttaggcatcccatgggacgtggatacagaaggtcta
agggaatatatgatcaaatatggagatttagaggattgtattgtgatgaaggaacgtgct
actggtcgttctcgtggattcggctatgtcacatttgctacagttgaggatgctaagaat
gcattgtctaaggagcactttcttggaaacagaatgctagaagtgaaagtggcgacaccg
aaggaggagatgagggctcctgcaaagaaagtgaccaggattttcgttgctaggattcct
ccgtctgtgtctgaagctactttcagaggttattttgagaagtatggtgaaataacagat
ctgtacatgccaaaggatccatctaccaagggacatcgtggaattgggtttattactttt
gcaaatgctgaatcagttgatgatctgatgagcgacacccatgaactgggaggttccaca
attgtggtggaccgagcaacacccaaggaagaagatttcagacctgttagtcggatgtct
cagggtggaggaggatatggtgcatataatgcatatatgagtgcaactactagatatggt
gcgcttggtgctcctaccttatatgatcatcatagttctatgtatggaagaggaggaggt
ggaggtggaggatttccatctcgtggtggcttgggccagaagatctttgttggtcgacta
cctcaagaggcaacaactgaagatcttcgccagtattttggtagatttggccgtgtttta
gatgtatatgtcccaaaggatccaagaagaccagggcacagagggtttggttttgtcaca
tttgctgatgatggtgttgcagatcgtgtttctcgaaggcctcatgagatatgtggacat
caggttgcaattgattctgctactccccttgatgatgctggtccaagtaacaattacatg
atggatcctcctcctcctgctcctgaagcatatgggggatatggtggtcctatgcgtact
tatggaaggatgtatgggggcctagattatgatgattggggttacggcctgggtggtggg
agaccttcaagatcagatatgagatacaggccctactag
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