Solanum pennellii: 107011198
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Entry
107011198 CDS
T04130
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107011198
03036 Chromosome and associated proteins [BR:
spen03036
]
107011198
Transcription factors [BR:
spen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
107011198
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
107011198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
CDC45
MlaC
YL1
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107011198
NCBI-ProteinID:
XP_015066085
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All DBs
Position
2:complement(54197258..54204199)
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AA seq
639 aa
AA seq
DB search
MTDGHQFNNISLGGRGGTNTGQLKVQSGGILWKKQGGGKAVEVDKDDIVGLTWMKVPRSN
QLGVRIKDGLYYKFTGFRDQDVASLTTYFQSSCGISPEEKQLSISGKNWGEVDLNANMLA
FLVGNKQAFEISLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFDGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRIFLLPKHNQPHTLVVITLDPPIRKGQTLYPHIVLQFETDNVVDLSLALS
EDLLNTKYKERLLMGYKGLIHDIFTQILRGLSGSKVTKPGKFRSSQDGYAVKSSLKAEDG
LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGTANMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLNEARATEGVPVLPDDDDDAVDPHLERIKNEAGGDDSDEE
DEDFVIDKDDGGSPTDDSGGDESDASGSGGEEEKPAKKKPKKEGTVSKPSTSRKKADDDG
SKKKKQKKKKDPNAPKRAISAFMYFSQSERENVKKSNPGIAFTEVGRVLGERWNKLSAEE
KEPFEAMAKADKKRYSEQISDYKNPQPTVVDSGNESGSS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcatcagttcaacaacatctctctcggcggccgtggaggcaccaataca
ggacagctcaaggttcagtctggaggtatattatggaagaaacaaggtggtggtaaggct
gtggaagttgacaaggatgatatagtgggccttacttggatgaaagttcctcgaagtaat
cagctgggtgtgcggattaaggatggtctttactacaaatttaccggtttccgtgaccag
gatgttgcgagtttgaccacctatttccagagttcttgtgggatatctccggaggaaaag
cagctatcaattagtggaaaaaattggggagaagtcgatctaaatgcaaatatgctcgct
tttcttgttggtaataagcaagcatttgagatatcactggcagacgtttctcaaacacag
cttcaaggaaaaaatgatgtcatgttggagttccatgtagatgatacaactggggctaat
gagaaagactcactgatggaaatcagctttcatatccctaattcaaacactcaatttgtt
ggtgatgaaaaccgacctcctgctcaagtttttcgtgataaaattatgtcaatggctgat
gttggtgccggaggtgaggaagctgttgtcacatttgacggtattgccatacttactcca
aggggtcgttataatgtggagcttcatctctcattcttgcgcttgcaagggcaagccaat
gactttaaaattcagtacagcagcgtagtccgtatttttttgttgccgaagcataaccaa
ccacacactttggtagttatcactcttgatcctccaattaggaagggccaaactttgtat
ccgcacattgtattgcagtttgagacggacaatgtggtagacctttcgctggctttaagc
gaagaccttctaaatacaaaatacaaggagaggctgctaatgggttacaaaggtcttatc
catgatatctttactcaaattttacgcggcttgtctggttccaaagttactaaaccaggg
aagttccgtagtagtcaagatgggtatgcggtgaagtcctcattgaaggctgaagatgga
ctcctctatcctcttgagaaaagcttcttctttttacctaaacctccaacacttatactg
catgaggagattgattatgtggaatttgagaggcacgctgcgggcacggccaacatgcat
tactttgatcttctcatcagactgaaaactgaacaagaacatcttttccggaatatccag
agaaatgagtaccacaatctttttgatttcatcagcggaaagggtttgaaaataatgaac
cttaatgaagctcgggctacagaaggtgttcctgttttgcccgatgatgacgatgatgct
gttgatccacatcttgagcgtattaagaatgaagcgggcggggatgacagtgatgaagag
gacgaagattttgtcatcgataaggatgatggagggtctcctactgatgattctggaggg
gatgagtctgatgccagtggtagtggtggtgaggaggagaaacctgcaaagaagaagcct
aaaaaggagggtactgtgtcaaagccatctacaagcaggaaaaaggcagatgatgatgga
tcgaagaagaaaaaacagaaaaagaagaaggatccaaatgctccgaagagggcaattagt
gctttcatgtacttctcgcagagtgaaagggagaatgtgaagaaaagtaatcctggaatt
gctttcactgaagtagggagggttcttggagagagatggaataagctgtcagctgaggag
aaagaaccctttgaggccatggccaaggcagataagaaacggtacagtgaacagatcagt
gattacaagaaccctcagccaactgtcgtggattcagggaatgaatctgggagttcttaa
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