KEGG   Solanum pennellii: 107011251
Entry
107011251         CDS       T04130                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107011251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107011251
Spliceosome [BR:spen03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107011251
 Complex B
    107011251
 Complex C
   U2 SnRNP specific factors
    107011251
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 107011251
NCBI-ProteinID: XP_015066148
LinkDB
Position
2:49479833..49484159
AA seq 804 aa
MLGITPILPLPAPPLDGNLGPTPLAQVVEEPNDVKMEENEEENNKDKVPASVATHTRTIG
IIYPPPDIRSIVDKTSQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAEA
RAQNQGSGEQPTQPEDKEATPAPTADDAEATAKPDPSAQFRPVRKVLEPPEAEQYTVRLP
EGITGEEMDIIKLTSQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
KVLMPPKGLTNKLQKSAADMTTVLERCLHRLEWERSQEQARQKAEDEIEQERVQMAMIDW
HDFVVVETIDFADDEDQDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDEEEVQL
VEEGMRAATLEENGGVKSAETMAISGENDPPMRIVKNWKRPEERILAERDPTKYVVSPIT
GELIPISEMSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTRPDIFG
TTEEEVSNAVKAEIEKKIEEPKQVIWDGHTGSIGRTASQAMSQNSGEDQNDGANDVRNLP
GPQVPPPPRPGLPSVRPLPPPPGLALNIPRPPNTFQYSTPTIAGAAPPPPQPPMVNMIPQ
VRPPPPPMLQLQGQQNLMVNRPPMPPSMAMSSHTLTIPPPPGSQFTPMGAPRPFVPHPMS
QPGMSMVPPPPMPQGMPPPPPPEEAPPLPEEPEPKRQKLDESVLIPEDQFLAQHSGPARI
NVSVPNTDEGNLKGQVLEITVQSLTETIASLKEKISGEIQLPANKQKLSGKAGFLKDNLS
LAYYNVASGETLSLSLRERGGRKR
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgttaggcatcacaccgatattgccccttccggcacccccgttggatgggaatctggga
ccaacacctttagctcaggtggtagaggaaccaaatgatgttaagatggaagagaatgaa
gaggaaaacaataaggacaaggttccagcatctgttgcaacacatacgagaactattggt
atcatttatccccctcctgatattaggagtattgttgacaagacttcacagtttgtggcg
aagaatggtccggaatttgagaagaggattgttctaaataacgctggcaatgcaaaattc
aacttcctgaatgcttctgatccttaccatgcctattatcagcaccgtttggctgaagct
cgcgcacagaatcagggttctggagagcagcctactcagccagaagacaaagaagcaacc
cctgctcctaccgctgatgatgctgaggcaactgcaaaacctgacccatcagctcaattt
agacctgtcagaaaggttcttgagccacctgaggcagagcaatatactgttcgactccct
gaagggatcacaggtgaagaaatggatatcataaagctgacatcacaatttgtggccaga
aatgggaagtctttcttaacagggctgacaagcagggagataaataatccccaatttcat
tttctaaagcctactcacagcatgttcatgtttttcacttcacttgcggatgcgtattcg
aaagttctgatgcctcctaagggcttgacgaataagctgcagaagagtgctgctgacatg
acaacagtcctagagcgttgtctgcatcggttggaatgggaaagatcacaggagcaggct
agacagaaagctgaagatgagatagaacaggagagggtgcagatggctatgattgattgg
catgattttgttgttgttgagacgatagattttgctgatgatgaggatcaggatttacct
ccacctatgacgcttgaggaggttataaggaggagcaagatgcctacattggaggaagag
gaatatgttgagcctggaaaggaggtggaaatggagatggatgaagaagaggtgcagctt
gttgaagaaggtatgcgagctgcgacgcttgaagagaatggtggtgtcaagagtgctgaa
accatggcaatttcaggagaaaatgatccaccaatgcggattgtgaagaactggaagcgg
cctgaagagagaatcctggcagaaagggacccaactaagtatgttgtctctcctataact
ggtgagttaatacctattagtgagatgtctgaacatatgaggatctctctcattgatccg
aagtacaaggaacagaaggacaggatgtttgcgaagattaaggaaacgactcttgctcaa
gatgatgagatctctaggaacattgttgggcttgcacgaactcgtccagatatatttggt
actacggaagaagaagtttcaaatgcggttaaggctgagattgaaaaaaaaatagaagag
ccgaagcaggtcatatgggatggtcacacaggtagcattggccgcactgcaagccaggca
atgtctcagaacagtggagaggatcagaatgatggtgcaaatgatgtaagaaaccttcct
ggtccacaggttcctccacctcctagacccggtcttccttccgttaggccactacctcca
cctcctgggcttgcgctgaatattcctaggcctcctaatacattccagtattccacacct
accatagctggtgctgctccgcctccacctcaacctcctatggttaacatgattcctcag
gttcggcccccacctcctcccatgctacaactacaaggtcagcaaaacctcatggtcaat
cgtcccccaatgcctccatcaatggctatgagttcgcatacccttactattccaccacct
cctggatcacagtttacacctatgggagcacctcggccctttgttccccacccgatgtcc
cagccgggaatgtctatggtcccgcctcctcctatgccccaaggaatgccaccacctcct
ccaccagaagaagctcctcctctccctgaagagccagagccgaagaggcaaaagcttgac
gagtctgttctcattcctgaagaccagtttttggctcagcattcgggacctgcaaggatc
aatgtatctgtgccgaatactgatgaagggaatctcaaaggacaagttctggagatcacc
gtgcaatctcttaccgaaaccattgccagtctgaaagagaagatttctggggagatccag
cttcctgcgaacaaacaaaagctgagtggaaaggctggttttctcaaggacaacttgtct
cttgcatactataatgttgcttctggagaaacactcagtctctctctgagagaacgtggt
gggagaaagagatga

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