Solanum pennellii: 107011331
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Entry
107011331 CDS
T04130
Name
(RefSeq) syntaxin-112
KO
K08486
syntaxin 1B/2/3
Organism
spen
Solanum pennellii
Pathway
spen04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107011331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107011331
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107011331
Membrane trafficking [BR:
spen04131
]
SNARE
Syntaxin (Qa)
Stx-PM
107011331
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
107011331
Exosomal proteins of other body fluids (saliva and urine)
107011331
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
CRASP-2
VIT1
Enkurin
cas_Cpf1_2nd
Motif
Other DBs
NCBI-GeneID:
107011331
NCBI-ProteinID:
XP_015066275
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All DBs
Position
2:52047889..52049608
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AA seq
299 aa
AA seq
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MNDLMTKSFLSYMELKKQAHLDLETERDLEMGQLSRTDEDNLSNFFREIEAVKGDIQEIT
NLLMDLQNLNEETKTTHGPKVLRGIRDRMDSDMVSVLRKAKIVKAKLEALDKSNVGNRKL
SVPYAQGSVVDRTRVNMTNGLRVKLRDIMNDFQALREKILSDYKDCLRRRYYNETGKEPT
EEVIEKMVSGESGKVQIFAAKTEMNLDDKDRHEAVMDIKKSLDKLHQVFLDMAVLVETQG
EQIDDIEHNMAIAGSFISGGTNSLFYAKQQQKKGRAWICWVWAVVLIILVVCLIATLSS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctcatgacgaaatcgttcttaagttatatggaattgaagaaacaagcccat
ctggatcttgaaacagagagggatttggagatgggccaactcagccgcacagatgaagac
aatctttccaacttcttccgtgaaatcgaggcagtgaagggtgatattcaagagataact
aatctcttgatggatcttcaaaatctgaatgaggagacaaaaactactcacggtcccaaa
gttcttcgtggcattagagacagaatggattctgacatggtctctgtccttcgcaaagcc
aagattgtcaaggcaaaacttgaagcacttgacaaatcaaatgtggggaatcgcaaatta
tcagtgccatatgcacaaggctctgtggttgatcgaaccagagttaacatgactaatgga
ttgagggtcaagcttagggacatcatgaatgattttcaggctttgagagaaaagatcttg
tcagattacaaagactgcctcagaagaagatattacaacgagacggggaaggagccaacc
gaggaagtgattgagaagatggtttcaggagaaagcggaaaagttcaaatatttgcagca
aaaacagagatgaatcttgatgacaaagataggcacgaggctgtaatggacataaagaag
agcctggacaaacttcatcaagtgtttcttgatatggctgttctagttgagactcaaggt
gaacagattgatgacattgagcataatatggccattgctggaagcttcatcagtggtgga
accaacagtcttttctatgctaagcagcagcagaagaagggaagggcatggatatgttgg
gtatgggctgtggtattgatcattttggttgtctgcttaattgctacattgagctcttga
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