Solanum pennellii: 107011354
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Entry
107011354 CDS
T04130
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107011354
Membrane trafficking [BR:
spen04131
]
Protein recycling
Others
EARP complex
107011354
Endosome - Golgi transport
Tethering complex
GARP complex
107011354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
PWI
vATP-synt_E
Motif
Other DBs
NCBI-GeneID:
107011354
NCBI-ProteinID:
XP_015066304
LinkDB
All DBs
Position
2:complement(59166189..59183239)
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AA seq
696 aa
AA seq
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MVDVTGNTSKTSLDLGSFVGDLNVDDETASDDISLEGLEEELQECQADDVVANILSKGTT
LREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDMILSQMETLLSGFQAEIGS
ISSDIKILQEKSMDMGVRLKNRKVAESKLAKFVEDIIVPPRMIDIIVDEEVNEEYMRTLE
ILSKKLKCADADPTVKTSKALKDVQPELEKLRQKAVSKVFDFMVQKLYALRKPKTNIQIL
QQSVLLKYKYILSFLKEHGKEVYLEVRAAYIDTMNKVLSAQFRAYIQALEKLQLDIATSN
DLIGVETRSTGLFSRGREPLKNRSAVFALGERINILKEIEEPPLIPHIAEASSKKYPYEV
LFRSLHKLLMDTASSEYLFCDDFFGEQTMFHDIFAGPFSVIDEHFSTILPNSFDAIGLML
MIRIIHQHQLVMSRRRIPCVDSYLDKVNIALWPRFKMVFDLHLHSLRNANIRTLWEDDVH
PHYVIRRYAEFSASLIHLNVEYKDGQLELNLERLRMAVDDLLVKLSQMFAKQKLQTVFLI
NNYDMIISVLKEAGPDGGKIQQHFEELLKNNTAIFVEELLLEHFNDLIKFVKTRGSEDPS
TGTERPITIAEVEPIVKDFASRWKAAIELMHNDVITSFSNFLCGMDILRAALTQLLLYYT
RLSDCIKRINGGSTLNKDLVSISSIMYEIRKYSRTF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgtgactggcaacacatcgaaaacctccttggatttgggatccttcgttggc
gatttgaacgttgatgatgaaactgccagtgatgatatatcccttgagggactcgaggaa
gagttacaggaatgtcaagctgatgatgttgtcgcaaacatactttctaaaggtacaacg
ttgcgggaatacactaaaggcgttgaaaataatttacgtcaagtcgaattggattctatc
caggattacataaaggaaagtgataatctcgtctcacttcatgatcaaattcgtgattgc
gacatgattctatcacagatggaaactcttctcagtggatttcaggcagagataggttct
ataagttcagatatcaaaattctccaagagaagtctatggatatgggagtgaggctgaag
aatcgcaaggtggcagagtcaaagctggcaaagtttgttgaagatattattgttcctcca
aggatgattgacataattgttgatgaagaggttaatgaggaatacatgaggacccttgaa
attttgagtaaaaaactgaagtgtgcagatgcagatcccacagttaaaacatcaaaagcc
ctgaaagatgtgcagcctgagctagaaaaacttcggcagaaagctgtctccaaggtgttt
gatttcatggttcagaagctatacgctttaaggaagcccaaaactaatatccagatcctt
cagcagagtgtcctcctaaaatataagtatatcctttcctttctcaaggagcatgggaag
gaagtgtatcttgaggttcgagctgcatatattgacacaatgaacaaggttctgagtgca
cagttccgcgcttatattcaagctttagaaaagcttcagttggatatagcaacatctaat
gatctgataggtgttgagaccagaagtacaggtcttttttcgagaggaagagaaccattg
aagaacaggtctgcagtttttgctcttggagaaaggataaacattctcaaggagattgag
gaacctccattaattccacatattgctgaagccagctcaaaaaaatatccgtatgaggtc
cttttcaggagtttgcacaagctgctcatggatactgcttcttctgagtaccttttctgt
gatgatttctttggagaacagaccatgtttcatgatatttttgctggcccgttttcagta
attgatgagcatttcagcacaattcttcctaatagttttgatgcaattggcttaatgctc
atgattcgcatcatacaccagcaccagcttgtaatgtccaggcgccgaattccatgcgtg
gattcatacttagacaaggtcaatattgctctatggccacgtttcaagatggtctttgac
ttgcacctccacagcctgcgaaatgccaatatcaggactctctgggaagatgatgttcac
ccacattatgtcataaggcgctatgctgagttttctgcgtcccttattcaccttaatgta
gaatacaaagatggccagcttgaactgaatctggagagactcagaatggctgttgatgac
ttgcttgtcaagctatcacaaatgtttgctaaacaaaagttgcaaacagtattccttata
aacaactatgacatgataatatcggttctgaaggaagctggtccagatggtgggaaaatc
cagcagcactttgaggagcttctaaagaataacacagccatattcgtggaagaattgctg
ttggagcattttaacgatctcatcaagtttgtaaagacgagagggtctgaggatccaagt
actggcactgaaagacctataactattgctgaagttgagccgattgtaaaggactttgca
agcagatggaaagctgccattgagcttatgcacaatgatgtgattacttctttcagcaat
ttcctgtgtggtatggacattctaagagctgcattaactcaacttcttctctattataca
aggctttcagattgtataaagaggataaatggtgggtctaccttgaacaaggatcttgtt
tcaatttcatcgataatgtatgagatcagaaaatactcgaggactttctag
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