Solanum pennellii: 107011362
Help
Entry
107011362 CDS
T04130
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
spen
Solanum pennellii
Pathway
spen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107011362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107011362
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
107011362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
107011362
NCBI-ProteinID:
XP_015066315
UniProt:
A0ABM1G5L7
LinkDB
All DBs
Position
2:50849597..50859028
Genome browser
AA seq
790 aa
AA seq
DB search
MITNGVEDEEKWLAAGIAGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEIFFREETNRGCSIVELYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRSIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQHQGHAREKEKREKERSELRDLVGKNLHVLGQIEGIDLDLYKDMVLP
RVLEQVVNCKDEIAQGYLMDCIIQVFPDEYHLQTLETLLGACPQFQPSVDIKTVLARLME
RLSNYAALSAEVLPEFFQVEAFAKLNSAIGKVIEAQEDMPIAGVVTLYSSLLTFSLHVHP
DRLDYVDQILGACVQKLSGKGKLKDNKATKQIVALLSAPLEKYKDIDTALKLSNYPRLME
NLDDSTSKEMANVLVQNILKNKTCISTAEKVEALFELMKALIRDLDEGVDDELDEDDFQE
EQNSVAQLIQMLHNDDPEEMLKIICAVKKHILTGGPKRLPFTVPPLIFNSLKFVRRLHSH
DENVPEEESSAMPKKFFQILNQIIEALSIVPVPELALKLYLECAEAANDSDIEPVAYEFF
TQAYILYEEEISDSKAQVTAIHLIIGTLQRMHIFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDNIKDGERVLLCLKRALRIANAAQQMSNATRGSSGSVLLFIEILN
KYLYFFEKGVSQINVASVQSLIELITTEMQSENTTADPAADAFFASTLRYIQFQKDKGGA
VGEKFESINS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgataactaatggagtcgaagacgaagagaagtggcttgccgctgggatcgccggcctt
cagcagaacgcattttacatgcatcgcgctcttgactcgaacaatctgaaagatgcattg
aaatactcggctcagatgctctcggagctccgaacttccaagctttctcctcacaaatac
tatgaactatatatgcgcgcatttgatgaattgaggaaattagagatcttcttcagagag
gagacaaatcgtggctgctccatcgttgagttgtatgagctcgtgcagcacgctggcaat
attttgcctagattgtatctcctttgtacagtgggttcagtgtacattaaatcaaaggag
gctcctgccaaggatattctcaaagatctggtggaaatgtgccgtagcatacaacatcca
ttacgtggtctcttcctaaggagttacctttcacaagtcagtagggataaattgcctgat
ataggatctgaatatgaaggggatgctgacactgtcatggatgcagtagaattcgtgctc
caaaatttcacagaaatgaacaaactttgggtgcgaatgcaacatcagggacatgcacgg
gaaaaggaaaaacgtgaaaaagaaaggagcgagcttcgcgatcttgtggggaagaacctg
catgttctaggtcaaattgagggcattgaccttgatttgtacaaagatatggtgcttcca
agagttttagagcaggttgtcaattgtaaagatgagattgcacagggatatttgatggat
tgcatcattcaagtcttccctgatgagtaccacttacaaactcttgaaacattacttggt
gcttgcccccagtttcagccatctgttgatatcaagacagtgcttgctcgtctgatggaa
aggctttcgaactatgctgctttaagtgcagaagttttacctgagttcttccaggttgaa
gctttcgcaaaacttaatagtgccataggcaaggtgatagaggctcaagaagacatgcct
attgccggagtggtgacattgtattcatcccttttgacattttctcttcatgtccaccct
gatcgccttgattatgtagatcagattctgggtgcatgtgtacagaaactttctggaaaa
ggaaagctcaaagacaacaaagcaacaaaacagatagtggccctactaagtgctcctctg
gagaagtataaggatatagatactgcactaaagctgtcaaattatcctcgtcttatggag
aatcttgacgattcaactagtaaagagatggctaatgttttagtacaaaatattttgaaa
aataagacttgcatttcaactgctgaaaaggttgaggcactttttgagttaatgaaagca
ctaattcgagatttggatgagggtgttgatgatgagcttgatgaagatgatttccaggaa
gagcagaattctgttgcgcagcttattcaaatgcttcacaatgacgatcctgaagagatg
ctgaagattatttgtgctgtgaagaagcacattttgacaggagggccaaagagacttcct
tttaccgtccctccccttattttcaactcactaaagtttgttaggcgactacatagtcat
gatgaaaatgttcctgaggaagagtcatctgctatgcctaagaaattctttcagattctg
aatcagattattgaggcgctctcaattgttcctgtacctgaactagcactgaagctgtac
ctggagtgtgctgaggctgccaatgactctgacatagagcctgttgcctatgaatttttc
actcaagcttatatactatatgaagaagaaatttcggactccaaagcacaggtgactgca
atacacttgataataggaactcttcagagaatgcacatctttggtgttgagaacagggac
acgttaacgcacaaggctacagggtactctgcaaagctcttgaagaaacctgatcaatgt
agagctgtgtatgcttgttcgcatcttttctgggttgacgatcaggacaacatcaaggat
ggagaaagggttttgctttgcttaaagcgggccttaagaattgcaaatgctgctcaacaa
atgtccaatgcaacccgaggcagcagtggatctgtcttgctctttatagaaattctaaac
aagtatctgtatttctttgagaagggggtctcacaaattaatgttgcctccgtccagagc
ctgattgagctaatcacaactgaaatgcaaagtgaaaatacaacagcagatcctgcagca
gatgccttcttcgcaagcaccttgcgatacatccagttccagaaggataaaggtggtgca
gttggggagaaattcgagtccatcaactcataa
DBGET
integrated database retrieval system
