Solanum pennellii: 107011387
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Entry
107011387 CDS
T04130
Name
(RefSeq) trafficking protein particle complex subunit 11 isoform X1
KO
K20308
trafficking protein particle complex subunit 11
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107011387
Membrane trafficking [BR:
spen04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107011387
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Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
TRAPPC13_C
Gryzun
NTS_TR130
Motif
Other DBs
NCBI-GeneID:
107011387
NCBI-ProteinID:
XP_015066355
UniProt:
A0ABM1G5P7
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Position
2:49767913..49776758
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AA seq
1176 aa
AA seq
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MEEYPEELRTPPVALVSLVGCPELHASITTHLHSEQPPINALALPDFSKISIFAKPSKDA
SVPPPPVAGILKKDWLLKHRTRVPAVVAALFNSDHVSGDPAQWLQVCTDLENLKGVLRGR
NVKLVVVVVAPSNSKDDLSEDRMIALRKRAELDSKYLITFVPSESELKQSLIRLGNTFSE
LANSYYKEEGRRIKARLERKNFHSTELNIRCCFKAAVYAEFCRDWVEALRLYEDAYHAVR
EMVATSTRLPPIQRLIEIKSVSEHLHFKISTLLLHGGKLAEAIAWFRQHCASYRKLVGAP
EVIFLHWQWLSRQFLVFAELLETSSITAQHVSTLVSEASDRATQWEFHSAYYFQLAAHYL
KEKSSSLELALSMSETSGEIDGNADSVIAASYVGQFAKLLEIGDAFIMQSLSDEDYSHYA
LAEGKRLQDSYEIIALLKKSFEAYNNDKASRMAAYCGFQMAREYFTVDEYSNAKEVFENV
ASLYRQEGWVTLLWNVLGYLRDCSKKTALVKDFIEYSLEMAALPVSTNVAGQRDCGPAGP
ASLAQREIIHNEVFSVIRGESESASTEENSSLKVTADNPLYLEIDLVSPLRAVLLASVAF
HEQVVKPGAETVITLSLLSQLPLNVEIDQLEIQFNQSECNFVIVNAQRSHLAAISCLQPG
RRVETAPTLELHTNKWLRLTYDVKPEQSGKLECIYVTARWGQHFTICCRAESPASMSDLP
LWKFEDIMQTIPMKDPGLAFSGQKAVQVEEPDPQVDLKLDSSGPALVGESFIVPVIITSK
GHSVHSGELKINLVDTRGGGLLSPREAESFSSDNLHVELVGISGRECEDLANSENIQKIQ
PSFGLISVPFLDEGESWSCKLEIRWNRPKPIMLYVSLGYFPQSPELSSQRAHVHKSLQIE
GKTAVVMSHHFMLPFRREPLLLSKTKPASDSDQIPSLPLNETSMLVVSAKNCTEVPLRLL
SMSVEAVDASTCDVKTKSKNPEEHVLLVAGEEFKQVFAVTPEVNLPKLNMGIVCLRWRRD
HGDGERLTSCSTTSAVLTKHSLPDVNVEQPPLIVSLDCPPHAILGNPFTYSIKITNRTQF
LQEVKYSLADSQSFVLSGPHNDTTFILPKSEHILSYKLVPLASGFQQLPKITLTSVRYSA
GFQPSVAASTVFVFPSEPHFGLKDIGEMRVESVAAE
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtatccagaagaactccgaactccgccggtagcattagtatctcttgtagga
tgtccagagcttcacgcttcaatcacaactcaccttcactctgagcagccgcctattaat
gctctcgcattgcctgatttctccaagatctcgattttcgctaagccttcaaaggacgct
tctgttccgcctccacctgttgccggaatcctaaagaaggattggcttcttaaacatcga
actagagtcccggcagttgtagcagctctctttaactccgatcacgtctccggcgatcca
gctcagtggcttcaggtctgcaccgatcttgaaaatctcaaaggtgtattacgcggaagg
aacgtaaaattggtcgtggtggttgttgctccatcaaattctaaagatgatttaagtgaa
gaccgtatgattgctctcagaaagcgtgcagaactggactccaagtatcttatcaccttt
gttccaagtgaatcagaacttaaacagtccctgatcaggttgggaaacacattttcagaa
ttagccaattcttattacaaggaggaaggaagaagaattaaagcacgtctcgaaaggaaa
aatttccattctacagagctgaatattcgatgctgtttcaaagctgctgtatatgcagaa
ttttgcagagattgggttgaagcattacggctgtacgaggatgcctatcacgcagtgcga
gagatggttgcaacatcaactagattgcctcctattcaacggttgattgagatcaaaagt
gtgtcagagcatctgcatttcaagatttctacattgttgctgcacggtggaaaacttgct
gaagcaattgcctggttccgccagcactgtgcttcttacaggaagcttgttggagcacca
gaagttattttccttcactggcaatggttaagccggcaatttctagtatttgctgaatta
ctagagacaagctctatcactgctcagcatgtttccactttggtttcagaagcttctgat
agagcaacgcagtgggaatttcattcagcttattacttccagctagcagctcattacttg
aaggaaaagagttcttcccttgaacttgcgctatccatgtctgaaacttctggtgagatt
gatgggaatgccgattctgtgatagctgcttcttatgttggtcagtttgcaaaactgctg
gagattggagatgcatttattatgcaatctcttagtgatgaagattattcccattatgct
ctggctgaaggaaagagattgcaggactcttatgaaattattgctctcctaaaaaaatct
tttgaagcatacaacaatgataaagcctctcggatggctgcctactgcggtttccaaatg
gctagagaatatttcacagtagatgaatatagtaatgcaaaagaagtttttgagaatgtt
gctagtctttatcgacaggagggctgggttactctattatggaatgtcttgggttacctc
agagactgctcaaagaaaactgctctcgtgaaagatttcattgagtactctcttgaaatg
gctgctctgccagtatctactaatgtggctggtcaaagagactgtggcccagctgggcct
gcaagtcttgcccagagagaaataatacacaatgaagtgttttcagtaataagaggagaa
tcagaaagtgcatctactgaagaaaacagtagcctgaaagtaacagctgataatcccctt
tatcttgagattgatcttgtcagtcccctcagagcagttcttcttgcttcagttgctttt
catgaacaagtagttaagcctggtgcagaaacagtgattaccctctcccttctatctcaa
ctgccccttaacgttgaaattgatcaattagaaatccaatttaatcagtcggagtgcaac
tttgtcattgttaatgctcaaagatcccatttagctgcaatatcctgtttgcagcctggt
cgtcgagtggagacagctcccaccctggaacttcacacaaacaaatggctgcggctcaca
tacgacgtgaaacctgagcaaagcggaaagctggaatgcatatatgtaactgcaagatgg
ggtcaacattttactatctgttgccgagctgaaagtccggcctccatgagtgatttaccc
ctatggaaatttgaagacataatgcaaactataccaatgaaggatcctggtctggctttc
tctggtcagaaggctgtccaagttgaagaaccagacccacaagtggatctaaagttagat
tcgtccggccctgcattggtcggagagagttttattgttcctgttattatcacctcaaag
ggtcatagtgttcactctggtgaattgaaaattaaccttgttgatacaagaggtggtggc
ttgcttagtccaagggaggcagaatctttttcatcagataatcttcatgtagaacttgtt
ggaatatctggacgagaatgtgaagatctagctaattcagagaacattcaaaaaatccag
ccctcttttggattgatttcggtcccatttttggatgagggagagtcgtggtcctgcaaa
ttagaaattagatggaaccgtcctaagcctatcatgctttatgtgtcactgggttacttt
cctcaaagtcctgaacttagctcacagagagctcatgtgcacaaaagcttgcaaattgaa
ggtaagactgctgttgtgatgagccatcactttatgttgccgtttcggagggaaccactg
ctgctgtcaaagactaaaccagcttccgattctgaccaaataccatcgctgcctttgaat
gaaacaagtatgctagttgttagtgctaagaactgcactgaggtgcctttgcgcttgttg
tccatgtccgtggaggcagttgatgctagcacctgtgatgtgaaaactaagagtaagaac
ccagaagaacatgtgttgcttgtggcaggagaagagtttaaacaggtttttgctgtcact
cccgaggttaatcttcctaagctaaacatgggtattgtgtgtttgagatggagaagggat
catggagatggagaaagattgacttcctgtagcacaacatctgcagttctaacgaaacat
agtctgcccgatgtaaatgtggagcaacctccactgatcgtgagtctagattgtcctcct
catgctattcttggaaatccatttacatactccatcaaaattaccaacagaacacagttt
cttcaggaggtcaaatactctttagcggattcacagagttttgttttatcagggcctcat
aatgatacgacttttattttgccaaagtctgagcacatacttagttataagcttgtacca
cttgcctcaggttttcagcagcttcctaaaattacattgacctcagtacgatactcagct
ggctttcaaccttcagttgcagcttctacagtgtttgttttcccatctgagcctcatttt
gggttgaaggatattggagagatgagagtggaatctgttgcagccgaatag
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