KEGG   Solanum pennellii: 107011416
Entry
107011416         CDS       T04130                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
spen  Solanum pennellii
Pathway
spen03420  Nucleotide excision repair
spen04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107011416
  09124 Replication and repair
   03420 Nucleotide excision repair
    107011416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spen04121]
    107011416
   03400 DNA repair and recombination proteins [BR:spen03400]
    107011416
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spen04147]
    107011416
Ubiquitin system [BR:spen04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     107011416
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107011416
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107011416
Exosome [BR:spen04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107011416
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 Tuberculin
Other DBs
NCBI-GeneID: 107011416
NCBI-ProteinID: XP_015066399
LinkDB
Position
2:complement(16506453..16542802)
AA seq 824 aa
MSQPTTNPKKRFIPTNPSSSSSSTPTTGGTAGRTPAYSSMKKAKSQALPCSIDSKNGQHV
HFSSDIDDPSGNSPMMEDSNIDSSSVAGGVTANLSRKKATPPQPAKKLVIKLLKAKPTLP
TNFEENTWATLKSAISAIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLYQRIEKECESHIA
AALRSLVGQSEDLVVFLSLVERCWQDFCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGL
QLFRKHLSLASEVEHKTVFGLLQMIETERLGEAVDRTLLNHLLKMFTALGIYAESFEKPF
LERTSEFYAAEGVKYMQQSDVPDYLKHVEVRLHEEHDRCLLYLDASTRKPLIATAERQLL
EQHISAILDKGFTVLMDGNRIEDLQRMYMLFCRVNDLESLRQALSSYIRRTGQSIVLDEE
KDKDMVPSLLEFKASLDTIWEESFSKNEAFSNTIKDAFEHLINIRQNRPAELIAKFLDEK
LRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMI
SKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPTGIEMSVHVLTMGYWPT
YPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEYPKGKKELAVSLFQ
TVVLMLFNDAENLSFQDIKEATGIEDKELRRTLQSLACGKVRVLQKIPKGRDVEDDDTFV
FNDQFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLL
ITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgtctcaacccaccaccaaccccaaaaagcgcttcatccccacaaatccctcatcatcg
tcctcatctactccgaccaccggtggcaccgccggccgaaccccagcttattcttccatg
aagaaggctaagtcacaagctctaccttgttctattgatagcaaaaacggtcagcacgtt
cacttttcctccgatatcgacgacccttctggaaactcccccatgatggaggattccaac
atcgattcctcttcagttgctggtggggttacggccaatttgtctcgcaagaaagctacc
cctcctcagcctgctaagaaactcgtaattaagctccttaaagcgaaacctacgttgccg
acaaactttgaggaaaatacttgggcaactctaaagtcagctattagtgcgatattcttg
aagcagcctgatccatgtgacttagaaaagctttatcaggctgtaaatgacctttgcctg
cacaaaatgggtggaaatctatatcaacgaattgaaaaagagtgtgaatcacacatagct
gcagctctacgttctttagttggccaaagtgaagatcttgtagttttcttgtcgcttgtt
gagaggtgttggcaggatttttgtgatcagatgttgatgattcgtggaatagctttgtat
cttgatagaacatatgtgaaacaaacgccaaatgtgcgttcactgtgggacatgggcttg
cagcttttccgcaagcatctctctcttgcctcagaagtagaacacaaaactgtttttggc
ctcctacagatgattgagaccgaaagattaggtgaggcagttgatcgaactctgcttaac
catcttttgaagatgttcactgccttggggatttatgctgaaagttttgaaaagccattt
cttgagcgtacttctgagttttatgctgctgaaggtgtcaaatacatgcagcagtcagat
gttccagattacctgaagcatgtggaggtaaggttacatgaagaacatgacaggtgttta
ctctacctggacgcaagtactagaaaaccactgatagcaactgcagagaggcaactttta
gaacaacacatttctgcaattctcgataagggtttcacagtgttgatggatggtaatcgt
attgaagatctccaaaggatgtatatgctattttgcagggtcaatgatctcgaatcttta
aggcaagcacttagctcatatattcgaagaactggtcagagcattgtgctagatgaagag
aaagacaaagatatggtacccagcctcttggaatttaaggcatctcttgataccatatgg
gaagaaagcttttctaagaatgaagcttttagtaacactatcaaggatgcatttgagcat
ctcataaacatccgccagaatcgacctgccgagctgattgctaagtttttggacgagaag
cttcgtgctggcaataaaggtacatcagaggaggaattggaggggacattagataaagtc
ctggttttgttcaggtttatacagggtaaggatgtatttgaagcattctacaagaaggat
cttgcaaaaagactgttgttgggtaagagtgcgtcaattgatgctgaaaagtccatgatt
tctaagttgaagaccgagtgtggcagccagttcactaacaaattggaaggaatgttcaag
gacattgaattatcaaaagagataaatgaatccttcaagcaatcttcccaagccagaaca
aagctcccaacagggattgagatgagtgtccatgttctgacaatggggtactggccgacc
tatccccccatggatgttcgacttccccatgaacttaatgtctatcaggatattttcaaa
gagttctacttaagcaagtacagtggtaggcgtttgatgtggcaaaattcattgggccac
tgcgttctgaaagctgaatatccaaaaggaaaaaaggagctcgcagtttctctttttcag
actgttgttttgatgctttttaatgatgcggaaaatcttagcttccaagatatcaaggaa
gcaactggaattgaggataaagagctgagaaggactctacagtctcttgcatgtggaaaa
gttcgtgttctccagaagattccaaaaggaagagatgtggaggatgatgatacctttgtg
tttaatgatcaatttactgctccactatatcgtataaaggtaaatgccatccagatgaag
gaaacagttgaggagaacacaagcactactgagagagtatttcaagaccggcagtaccag
gttgatgctgctattgttaggataatgaagaccagaaaagtgttgagtcataccctctta
ataactgaactctttcagcagcttaaattcccaataaaaccagctgatctgaagaaaagg
attgaaagcctcatagatagggagtacctggaacgggacaaaaacaatcctcaaatatac
aactaccttgcttag

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