Solanum pennellii: 107011428
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Entry
107011428 CDS
T04130
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
spen
Solanum pennellii
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
TRCF
Cas3-like_C_2
RecG_dom3_C
DUF3198
Motif
Other DBs
NCBI-GeneID:
107011428
NCBI-ProteinID:
XP_015066421
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Position
2:59601780..59619494
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AA seq
826 aa
AA seq
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MAAAKASLFFSPSECFLTTRLCKLFSTTQKPSFPSPSSSSITLTNVLNADAVYTKLPPRL
RNARQEQERDAISLLNERIRREHAKRDHSPLRPAMDSEEADKYIQLVKEQQQRGLQKLKS
DRARQGAPHDAAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEYVF
IEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRMKGKVAVQKMVVD
LMELYLHRLKQKRPPYPKTPAMAEFASQFPFEPTPDQKQAFSDVERDLTESENPMDRLIC
GDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVISERFSRYPNIRVGLLSRF
QTKSEKEEYLSMIKDGRVDIIVGTHSLLGNRVEYNNLGLLVVDEEQRFGVKQKERIASFK
TSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIRTHLSAYSKDKVISAIKHEL
DRGGRVFYVLPRIKGLEDVMEFLELAFPHVEIAIAHGKQYSKQLEETMERFARGDIRILI
CTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAHLFYPDKSLLSDHA
LERLAALEECCELGQGFQLAERDMAIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKV
DEHRVISVPYPAMELDININPHLPSEYINHLENPMQIINSAEKAAEKDIFNLMQFTENLR
RQYGKEPYSMEILLKKLYVRRMAADLGITSIYASGKMVGMKTNMSKKVFKLITDSATSDI
HQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSSLPTLIKY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcaaaggcctccctcttcttctctccctcggagtgctttctcacaactcgt
ctctgcaaactcttctccactactcaaaaaccctcttttccctctccctcctcctcttct
attaccttaaccaatgtcctcaatgccgatgctgtatataccaaattgcctccccgacta
cggaatgcaagacaggagcaagagcgagacgccatttctctactcaacgagcgaattcgc
cgggagcatgctaagagagatcactcccctcttagaccggccatggattccgaggaggct
gataagtacattcagctcgtgaaagagcagcagcaaaggggcctccagaagctcaaaagc
gacagagccagacaaggtgctccacatgatgcagctcaacctacctttagttacaaggtg
gacccttacactctccgttccggcgattacgtggtccacaggaaagttggaattggtcga
ttcgttggcatcaaatttgacgttccaaaggattccaaagagcctattgaatacgtcttt
attgagtacgctgacggtatggctaaattacccgtcaagcaggcatctcgtttgctctac
cgttacaacctccctaatgaaaccaaaaggccacggactttgagcaagttaagcgatact
agtgcatgggagaggagaaggatgaagggaaaagttgcagttcagaaaatggttgtggat
ctaatggagctatacctacacaggttaaaacaaaaaaggcctccatacccaaagactcca
gctatggctgaatttgcatctcagtttccttttgaacccacaccggatcagaaacaggct
ttctcagatgtagaaagggacttgacagagagtgaaaatccaatggacagattaatttgc
ggagatgttggttttggtaaaactgaggttgcactgcgtgccatcttctgtgtagtctct
gcagggaagcaagctatggttctagcgccaacaatagttttagctaagcaacattttgat
gttatctcagagagattttcaagatatcctaacataagagttggacttcttagcaggttt
cagaccaagtcagagaaagaggagtacttgagtatgattaaagacggacgtgtggacatt
attgttgggactcattcactacttggcaatcgggttgaatataataatctgggtctactt
gtggttgatgaggaacagaggtttggtgtaaaacagaaggagaggattgcttcatttaaa
acttcagtggatgtactcacactttcagcaacgcctattccgagaactctatatttagca
ttaactggatttcgtgacgctagtttgatctcaacaccgcctcctgagagagttccaata
agaacgcatctttcagcttacagtaaggacaaagtaatatcagctatcaagcatgaattg
gaccgtggtggtcgagttttttatgtcttgccccgcattaaaggtcttgaggatgttatg
gaattcttagaactggcatttccacatgttgaaatagctattgctcatggaaagcaatac
tcaaaacagcttgaggaaactatggaaagatttgcacggggagatattagaattcttata
tgtacaaatatagtagaaagtggccttgatattcaaaacgcaaacacaatcatcattcaa
gatgttcagcaatttggacttgcacaattgtatcagttgcgtggaagggtcggacgggcg
gataaggaagctcatgcacatttattctatcctgacaaatcacttctttcagaccatgca
ctagagagacttgctgctcttgaagagtgctgtgaacttggtcaaggttttcagcttgca
gaaagagacatggctattagaggatttggcaatatttttggtgagcaacagacgggggat
gtcggcaatgtgggcattgatctattctttgagatgttgtttgaaagcttgtctaaggtt
gatgagcatcgtgtaatatcagttccttaccctgcaatggagcttgatatcaatataaac
cctcatcttccttctgagtacataaaccatttggagaaccccatgcaaatcatcaatagc
gctgaaaaagcagctgaaaaggacattttcaacctgatgcaatttacggaaaacctgagg
cgtcagtatggcaaggaaccttactctatggaaatcctattgaaaaagctttatgtcaga
agaatggcagcagatttaggaattaccagcatttatgcttcaggaaagatggttggcatg
aaaacaaacatgtcaaaaaaggttttcaagttgataacggattcagcaacttcagatatt
catcaaaattctctgatatttgaagatggccaaataaaggctgaactgctcttggagcta
cctaaagaacagttgctgaattggatcttccaatgcctcgcagaattatattcctcattg
ccgaccttgataaaatattag
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