KEGG   Solanum pennellii: 107011469
Entry
107011469         CDS       T04130                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
spen  Solanum pennellii
Pathway
spen03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107011469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spen03036]
    107011469
Chromosome and associated proteins [BR:spen03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     107011469
    NSL complex
     107011469
   HMT complexes
    COMPASS/SET1 complex
     107011469
    COMPASS/SET1 complex (yeast)
     107011469
    MLL-HCF complex
     107011469
    MLL3/MLL4 complex
     107011469
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     107011469
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 eIF2A Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WD40_like RMC1_N Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_HPS5 WD_LRWD1 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_WDR75_2nd VPS8_N Beta-prop_VPS8 Ge1_WD40 Big_7 DUF5888 WDR54 PKD PALB2_WD40 PQQ_2 Beta-prop_NOL10_N KNTC1_N Dna2_Rift ZP1_ZP4_Ig-like
Other DBs
NCBI-GeneID: 107011469
NCBI-ProteinID: XP_015066470
UniProt: A0ABM1G603
LinkDB
Position
2:57359042..57365519
AA seq 314 aa
MASPIETSESFKPYELKFTLSGHKRAISSVKFSDDGKILATSSADKTARTWDVSDGSLLH
EFQGHEQGISDVAFSSDGRHLVTASDDKTVRLWDVSTGSHIKTLTGHTNYVFCVNFNPQA
NMLVSGSFDETVRLWDVKTGKCLKVLPAHSDPVTAVNFNRDGSLIVSSSYDGLCRIWDAS
TGHCMKTIIDDENPPVSFVKFSPNGKFILVGTLDNSLRLWNFSTGKVLKTYTDHVNSKYC
ISSTFSITNGKYIVSGSEDNCVYLWELQSRKIVQKLEGHTDTVISVSCNPTQNMIASGSL
GNDKTVKIWTQGGD
NT seq 945 nt   +upstreamnt  +downstreamnt
atggcttcccctattgagacttcagaatctttcaaaccctacgagcttaaattcactctc
tccggtcacaaacgcgctatttccagtgtcaaattctctgacgatggcaaaatcctagcc
acctcgtccgccgataaaaccgcccgaacatgggatgtctccgacggatcccttcttcac
gaattccaaggtcacgaacagggtatctccgatgtcgccttctcctccgacggccgtcac
ctagttactgcctccgatgacaaaactgtacgattatgggacgtttccaccggttcccat
atcaaaacccttacaggtcacacaaattatgttttttgtgttaacttcaatccccaagct
aatatgttggtttctgggtcgttcgatgagacggttaggttatgggatgtgaagactggg
aagtgtctcaaggtgctgccagcgcattccgatccagtgacggctgtgaattttaatcgg
gatggttcgttgattgtgtcaagcagctatgatgggttgtgtagaatttgggatgcttca
accgggcattgtatgaagaccataattgatgatgaaaacccacctgtgagtttcgtcaag
ttctcgcccaatggcaagtttatactcgttggcactttggataattctctgaggctttgg
aacttctcaacaggaaaagttctgaaaacttacacagaccatgtcaactcaaagtactgc
atttcatcaacattttccataacaaatggtaagtatatcgtcagtggttctgaggataat
tgtgtatatttgtgggaacttcaatcaaggaagatagttcaaaagttggaaggccatact
gataccgtgatttctgtatcatgcaaccccactcagaacatgattgcttctggttcgctt
gggaatgacaagactgtgaagatatggactcaggggggagactaa

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