KEGG   Solanum pennellii: 107011503
Entry
107011503         CDS       T04130                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107011503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107011503
Spliceosome [BR:spen03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107011503
 Complex B
    107011503
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 107011503
NCBI-ProteinID: XP_015066514
LinkDB
Position
2:52379808..52385897
AA seq 560 aa
MQEYEGNGEDIENNGSSPYSDSKSQHTSRDPEKERGSSRSREKEREKGRDKDRDRDRNRE
RDRDRDRDRGKERDKDRDRDREREKDRDRHHRDRHRDRSDRRERTRDRDEDDLQRTRDYD
RRRDNDKDREDRQRHKPSSRGRSEHRSRSRSRSPSKSKRISGFDMAPPTSALLSGATDVA
GQVPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ
SVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGG
PVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTES
QIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR
RANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVSVDELKDDDDYQD
ILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGG
NQVIAVFYPENKFSEGDYEA
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgcaggaatatgaaggtaatggagaagatatagagaataatggttcttctccttacagt
gactccaagtctcagcatacttctcgtgacccggagaaagaaaggggctcatcaagaagc
agggagaaggagagggagaaagggcgtgataaagaccgggacagggacaggaatagagaa
agagatagagatagagacagggacagaggtaaggaaagggacaaagatagggatagggac
agagagagggagaaggaccgtgatcgtcatcacagagatcgtcatagggatcggagtgat
aggagggagaggaccagagatcgagatgaagatgatcttcagcgaactcgagattacgat
aggcgaagagacaatgacaaagatagagaggaccgacagagacacaagcctagctctagg
ggtagatccgagcatagatcaaggtctagatcacggtcaccatctaagagcaaaaggatc
agtggttttgatatggcacctcccaccagtgcattgctatctggcgctactgatgttgca
ggtcaagttcctgggaccactaacccatcaatacctggaatgttttctaacatgtttcct
ctagcagcaggccagtttggagctctccctattatgccagtccaggcaatgacacagcag
gctaccagacatgctcggcgagtttatgttgggggacttccgcctactgcaaatgaacag
tcggttgctaccttctttagtcatgtcatgtatgcaatcggaggaaacactgctggtcca
ggggatgctgttgtcaacgtttatataaaccatgagaagaagtttgcctttgttgagatg
agatctgttgaggaagctagtaatgcaatggctttggatggtgtcatttttgagggcgga
ccggttaaggttagaagacccagtgattacaatccttccttggcagctacacttggtcct
agtcaaccgagccccaacctcaacctggcagctgttggattgacaccaggttcttccgga
gggcttgaaggacctgaccgtatatttgttggtggtttaccctattattttacagaatca
caaatcagggaacttttagagtcttttggtcaacttcgaggatttgatctggtcaaagat
agagaaactgggaattcaaaaggttatgctttttgtgtgtaccaggatgtctctgttact
gatattgcttgtgcagctcttaatgggattaagatgggggataaaactcttactgttagg
cgggctaaccagggcacaacccaacccaaccctgagcaagagagtgtattgttgcatgca
caacagcagatagctttgcagaggttcatgttacaacctggtgcattagccacaaaggtt
ttgtgcttaacagaagtggttagcgtagatgagctcaaagatgatgatgactatcaagat
attttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcatt
ccacgtccaaatcctaatggtgagcctacacctggactcgggaaggtgttcctggagtac
gcagatgttgacagttccagcaaagctcgccaagggctgaatggaagaaaatttggtggt
aaccaagttattgctgtcttctatccagagaacaagttctctgagggagattacgaggct
taa

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