Solanum pennellii: 107011504
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Entry
107011504 CDS
T04130
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107011504
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107011504
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107011504
Membrane trafficking [BR:
spen04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
107011504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
ZapB
Motif
Other DBs
NCBI-GeneID:
107011504
NCBI-ProteinID:
XP_015066516
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All DBs
Position
2:complement(42749649..42774706)
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AA seq
997 aa
AA seq
DB search
MDSQPSPSSGRFESSPSTIKNTPFLTKSISDASSSSPHSQSLASILNNPHAGKSDGFWWW
STSSSIPTPDFLPLSTLPKPGSETRVPDFQSYLSSISDPYARFHDIQQHARFESLEDQDD
QNALVACLKEVPALYFKEDFELEDGATFKAACPFRTTAENLVTQEKLSQYLDVVELHLVR
EISLRSNSFFEAQGQLEDLNSKIVQGCDRIRELKETIKLLDDNLVGSARKVQELNVQRSE
LISHQDKLNLILYVNQALSTLKLLVASADCAGALDVIDDLQHLLDGDELAGLHCFRHVRD
QLAASIDSIDSILSAEFMRISIHGAGNVDALSTSKFKVQKTISMNGEGHEVKLDEEDTYN
LRDRLLPFVIGLLRTAKLPAVLRIYHDTLTADMKTAIKMAVEELLRVLGAQPMDSDFVAG
ERAVDADGGSSSLASRLRSLSPECFVHLLKAVFLIVQAHLAQASEVKRAIEWILCHLDGH
YAADSVAAAIALGAVASETAHETVDQVNSSLQLSVQRNSSKVSSAHGNGNEGITSSTLSR
NFRADVLRENAEAVFAACDAAHGRWAKILGVRSPIHPRLRLQEFLNIYNITQEFITATEK
IGGRLGYSIRGTLQSQAKAFIDFQHESRMAKMRAILDQENWAEIDVPDEFQTIVTSLFCS
ESETRELADEVSADIAPSIRKMVLGDGSPTAEARLQKISQNAQHTDSTPRSESTAQSNET
NSRERGKSSARLLFFRGVGYHMVNCGLILVKMLSECIEMNNSLPGLSSEVVHRVVEILKL
FNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFTYTIIPELKRILFLKVPETRKAL
LILEVDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIVESWNRPENTDTQPSQFAR
SITKEVGLLQRVLSRTLHELDVQAIFRQVVIIFHSQISEAFSHLDISSEHVKKRMYCDVQ
HIIACIRSLPSDSKSNPPNWGQLDEFVAKNFGEEVGQ
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggattctcagccttccccttcttcgggaaggttcgaaagtagtccttctactatcaaa
aatactccattcttgaccaaatcaatttccgatgccagtagcagcagccctcatagccaa
agcttagcctccattctcaacaacccacatgccggaaaatccgatgggttctggtggtgg
tccacttcatcatctatccccacacctgacttcctacctctatcaactctacccaaaccc
ggatccgaaactcgggtccctgatttccaatcctatctctcttccatctccgacccatat
gctcgtttccatgacattcaacagcacgcgaggtttgagtcactagaagatcaagacgac
caaaatgccctcgttgcttgcttgaaggaagtacctgcgctgtacttcaaagaggatttt
gagttagaggatggtgctacttttaaagctgcctgcccatttaggaccactgcggaaaat
ttagttacacaggagaagctatcacagtatttggatgtagtggaattgcacttggttagg
gagatttcgttgagatcaaattccttttttgaggcacaaggtcagttagaagatttaaat
tcgaagattgttcaggggtgtgataggataagggaattgaaggagactataaagctctta
gatgacaatttggtggggtctgctagaaaggtacaagagttgaatgttcagagaagtgaa
ttgatttcgcaccaagacaagttgaaccttatactttatgttaatcaagctctgtcaact
ctcaagttgcttgttgcatctgcagattgtgccggagctttagatgttatagatgattta
caacatttattggatggagatgaattagctggtctacattgtttccgtcatgttcgtgac
cagttagccgcttcaattgattccattgacagtattctttcagcagaatttatgcgtata
tctatacacggagctggcaacgtggatgctctaagtacatcaaaatttaaagtgcagaag
acaatttccatgaatggagaaggccatgaagttaaattagatgaagaagacacttataat
ttgcgagaccggctacttccttttgttattgggttgcttagaaccgcaaaactccctgct
gtattgagaatataccatgacactcttacggctgacatgaaaactgccattaagatggca
gttgaagaactgctacgggtgcttggtgcccaacctatggattcagattttgttgcagga
gaacgagcagttgatgctgatggtggaagctcatcccttgccagtagattgagaagcttg
tcgcctgaatgttttgttcatcttttgaaggctgttttcctgatagtgcaggcacactta
gcacaggcatctgaagttaaaagagccattgagtggattttgtgccatcttgatggccat
tatgctgctgactcagttgctgctgcaattgcacttggagcagtggcatcagaaacagct
catgaaaccgtcgatcaggtaaattcctcgctgcaactttctgtgcaaaggaactcttcc
aaggtctcttctgctcacgggaatggaaatgagggtataacgtcatcgactttatcgaga
aatttcagagctgatgtattgagagaaaatgcagaagccgtttttgcagcttgtgatgct
gctcatggcagatgggcaaagatccttggagtgcgttctcctatccaccctagactgagg
ttacaggagtttctaaatatatataacatcactcaagaatttataacggctactgagaag
attggtggaagattgggttatagtattcggggaacattgcaatcacaggccaaggccttt
attgatttccaacacgaatccaggatggcaaagatgagggccattcttgaccaggaaaat
tgggctgagattgatgtccctgatgagttccagacaattgtcacatcactgttctgctca
gaatctgagacccgtgaacttgctgatgaggtttcagctgatattgcaccaagcatccgt
aagatggtcctgggtgatggttcccctacggcagaagctagacttcaaaagatatcacaa
aatgcacagcacactgattctactccacgttcagagagtacagcacagagcaatgaaact
aactcaagagagcgtggaaaatcttctgctagacttcttttcttcagaggtgttggatat
catatggttaactgcggcttgattttggtaaagatgttgtcagaatgtattgagatgaat
aatagcttgccgggcctatcttcagaagtcgtccaccgtgttgttgaaatcctgaaattg
ttcaatacaaggacttgtcagcttgtccttggtgctggagcaatgcaggtttcaggtttg
aagtctattacttctaaacacttggccttggcaagtcaagtcatcagtttcacatacacc
ataattcccgaactcaagaggattctgttccttaaagtgcctgagacgcgcaaggcactg
ctgattttggaggttgatcgtgtagcacaggactataaggtgcaccgagatgagatacac
tcgaagttggtgcaaataatgagggaaaggttgctggtccacctccgtgggctgccacag
attgttgagagttggaataggccagaaaatactgatacgcagccaagtcagtttgctcgt
tctatcactaaggaagttggccttcttcaacgtgtcttatctagaaccctgcatgagtta
gatgttcaagctattttcaggcaagtggttattatcttccattctcaaatttcagaagcg
ttttcgcacttggatatcagcagtgaacatgttaaaaaaagaatgtattgcgatgtgcag
catattattgcatgtatcagatcattgccttcagatagcaaatctaatcctcctaattgg
ggacagcttgatgaatttgtggcaaaaaattttggtgaggaagttggtcaatag
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