Solanum pennellii: 107011739
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Entry
107011739 CDS
T04130
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107011739
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107011739
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
107011739
NCBI-ProteinID:
XP_015066837
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All DBs
Position
2:complement(54473040..54481496)
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AA seq
466 aa
AA seq
DB search
MSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLL
PEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEP
ESNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALVQYPDVTIAAAAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQASAVHAAPAVW
HNPQSGPVQSSAGYAATGAVPGQAPPPAWNPNLQGGGSTFPSAPTGYPGHSYAPPAYATG
VHPIGSSQQTNHIATGSQPFTVSQPFHPSTMPPGGVPPPGHAPYHG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatccgggcaacagcagttccggtacacgcagacaccgtcgaaagttcttcac
ctccggaatcttccatgggattgcagcgatgaagagctagtagagctttgcaagcccttt
ggtaaaattgtcaatacaaagtgtaacgtcggggccaatcgcaaccaagcgtttgtcgaa
tttgctgaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcct
gctcaagttcgtggcaagacggtgtacattcaatattctaacaggaatgaaattgtcaat
aataagagtccgggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaa
gctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaa
aagattgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgacgtt
gggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtacctgctt
ccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaat
atcaagtttcaatctcatcgaagcagggactacacaaacccttatctcccagtaaatcct
actgcaatggagggggttcttcagcctgttgtaggtccagatggaaagaaaaaggaaccc
gagagtaatgtgctttttgcctcgttagaaaatatgcagtatgctgttaccgttgatgtc
cttaacacggttttttctgcatttggtactgttcagaagatcgctatatttgagaagaat
ggtcaaacccaggcattagttcagtatcctgatgtaacaattgcagctgctgcaaaggac
gctttagaggggcactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctgaatgtacaggcatacagtgacaaaagtagagactacacagttcca
gaatcaagtttgcttgcgatgcaacaagcatctgcagtccatgccgcaccagctgtttgg
cataatcctcagtctggtccagtgcagtcatcagctggctatgccgctactggtgctgtt
cctggccaagcaccaccacctgcatggaatccaaatttgcagggtggaggatcaaccttt
ccatcggctcctaccggatatccaggccattcatatgctccaccagcttatgcaactgga
gtacatcctattggatcgtcacagcagaccaatcacattgctactggtagtcaacctttt
actgtaagtcagccttttcatccatcaaccatgccgcctggaggtgttcctcctcctggg
catgcaccttatcatggttaa
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