Solanum pennellii: 107011752
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Entry
107011752 CDS
T04130
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107011752
Enzymes [BR:
spen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
107011752
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107011752
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
Methyltransf_32
zf-U11-48K
Methyltransf_31
Methyltransf_12
Maf_flag10_N
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
107011752
NCBI-ProteinID:
XP_015066867
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All DBs
Position
1:87075687..87080070
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AA seq
445 aa
AA seq
DB search
MAARCNFWLPKKKRFCSNVLLRDSQFCGNHTQRSDGQWVPCPIHPSHSVLEGNLQSHLKR
CPFFKQAQSLSIQPFYQEGINAGKEEEGVQNFSSEMKRNAVHGMTLFEFSQLINKIKSIH
ASICSDIGDSFKIPQACDIWTNRQVDRGLPFQEKHVMQQASILGNLEEFGVLKSCKDDAV
SGPVKLEASGDDDDVPAVVEFGAGRGYLTQVLADCYRIKKILLVERKSYKLKADRSLRQK
ESVTLERLRIDIEDLKLNAVESLQGVPYLAIGKHLCGPATDMTLRCCISKQCNQHNDAPS
DSTCRLIGLAIATCCHHLCQWKHYINKRYMLDLGITKDDFNAMTWLTSWAVDADHGSDLC
GTGSFDLQIRENEHVESDPNTYDVKNMVKDMKAVDRAVVGLMCKDIIDVGRFMWLNEHGL
ECELVKYVPSNISPENRLLVARQKS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgctgcaacttctggcttcccaagaagaagagattttgctcaaacgtcctt
ctccgagattcacagttctgcggaaaccatactcaaagatctgatggacaatgggttcct
tgccctatacacccttctcactctgtgctggaagggaatctgcagagtcatcttaagcga
tgcccatttttcaaacaagctcaatctttgtcgattcagcctttttaccaggagggtatt
aatgctggcaaagaagaagaaggggtgcagaattttagttcagagatgaagaggaatgca
gttcacgggatgaccctttttgaattctcccagttgattaacaagatcaagtctattcat
gcttccatatgtagtgacattggtgattcattcaagattcctcaagcttgtgatatttgg
actaatcgacaagtggaccggggtttaccatttcaagagaaacatgtaatgcagcaggcc
tctattctagggaatctagaagaatttggggttctgaaaagttgtaaggatgatgctgta
tcagggccagttaagttagaagcatccggtgacgacgatgatgttcccgccgttgttgaa
tttggagcaggaagagggtacttgacacaagttctggctgactgttacagaattaagaag
attttattagttgaacgcaaatcatacaagctcaaggctgatcgaagtttgcgacagaaa
gagagtgttacgctggagcgattgagaattgacattgaggacctaaagttgaatgctgtt
gagagtttacagggagttccttatctagcaattggcaaacatctttgtggccctgctaca
gatatgactctaagatgttgcatcagcaaacaatgcaatcaacataatgatgctccttct
gattcgacgtgccgcctgatcggcctagctatagctacttgctgccatcatctttgtcag
tggaagcattacataaataagcgatatatgttggatttgggaatcactaaggatgatttc
aatgcgatgacatggcttaccagctgggccgttgatgcagatcatggttcagatctttgt
ggcactgggtcttttgatctacaaatcagggaaaacgagcacgtagaatcagatccaaat
acatatgacgtcaaaaacatggtgaaggatatgaaggctgtggatagagctgttgtagga
ttgatgtgcaaggatataatagatgttggaaggtttatgtggctcaacgaacatggactt
gaatgtgagcttgtcaagtatgtcccgtcaaatatctctccagaaaaccgattgttggtt
gctaggcagaaaagttga
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