Solanum pennellii: 107011816
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Entry
107011816 CDS
T04130
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107011816
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107011816
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
107011816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4
Rtf2
zf-C3HC4_3
Prok-RING_4
mTERF
zf-C3HC4_2
RING_XB3-XBAT31
DUF1319
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
107011816
NCBI-ProteinID:
XP_015066954
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All DBs
Position
2:complement(57314069..57321901)
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AA seq
386 aa
AA seq
DB search
MELSTIKDAFDRVTKKQKVASSKSQEVIEQIGHEIEQALLRIQSANDTASLSEHKVLLSE
LKAKLKEVAPLSQMEGTQKELNVALSKYPKLLEKSLNPDISKAYRNVGSDIHTVNQIIAS
HFYREGHFDLGDCFVNEARESEAAGQKTPFLQMYQILEAMRCRNLEPALSWATTNSEKLK
LTGSDIEMKLHRQQFVEILQNRGRDGALNYARTFFPPFATKYLAEIQRLMACLLWAEKLE
SSPYSDLLSPLHWDKLAEELARQFCNLMGQSYESPLSVTIAAGVQGLPTLLKLMNVMTGK
KQEWQSMKQLPVPVDLDREFQFHSIFVCPVSRDQASEENPPMLMSCGHVLCKQSITKLSK
NNNTRPFKCPYCPTEVEVGQCRQLFF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagtaccattaaagatgcctttgatcgtgtcacaaagaagcaaaaggttgca
tcatcaaagtctcaagaagtgatagagcagatcggtcatgaaatagagcaagcgctgttg
agaatacagtcagctaatgatactgcttctttgagtgaacacaaagtgcttcttagtgaa
cttaaagccaagttgaaggaagttgctccactcagtcagatggaaggaacacaaaaagaa
ctaaatgttgcactaagcaagtacccaaagctccttgagaagtcactcaatcctgatata
tcaaaggcttacaggaatgttggttctgatatccatactgttaaccagataattgccagc
catttctaccgggaaggccactttgatcttggtgattgtttcgtgaatgaggccagagaa
tctgaagctgcaggccaaaaaactccttttctgcaaatgtatcaaatacttgaagccatg
aggtgtaggaacctggagccagctctgagttgggccaccacgaatagtgagaaacttaag
ctgactggatctgatattgaaatgaagttacacaggcagcagtttgtagaaattctgcaa
aacagaggtagagatggagctttgaattatgctagaactttctttccaccttttgccacc
aaatatttggcagagatccagaggctcatggcctgtctattgtgggctgagaaactggag
tcctcaccttactcagatttactatcacctctccactgggataaattggctgaagagctt
gctcggcagttctgcaatctcatgggtcaatcctatgagagtccgttgagtgtgaccatt
gcggcaggcgtccagggattgccaacccttctgaaactgatgaatgtgatgactgggaaa
aaacaggaatggcaatccatgaaacagttacccgtgccggtggacttggacagagaattt
cagttccactctatctttgtctgtccagtgagtcgggatcaggcatctgaggagaatccc
cctatgctgatgtcttgtgggcatgtgctatgcaagcaatctattaccaaactgtcaaag
aataacaacacacggcctttcaagtgtccttactgccccacggaggttgaggtcggtcag
tgtagacaattgttcttctaa
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