Solanum pennellii: 107011868
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Entry
107011868 CDS
T04130
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107011868
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107011868
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107011868
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107011868
Spliceosome [BR:
spen03041
]
Common components
Common spliceosomal components
SR proteins
107011868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
CoV_nucleocap
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107011868
NCBI-ProteinID:
XP_015067022
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All DBs
Position
2:complement(50695622..50698968)
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AA seq
228 aa
AA seq
DB search
MADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGL
SSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLE
GRSITVEKSRRKRPRTPTPGHYLGLHQSARGDGYHGDRGRYRGRGDYGYRRSPRRSPYRG
GRDYSPRHSPYRGGRDYSPRRSPYAGRSRRARSRSYSPYERNYPRGYR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgcaaaaggtattcccgctctccttcaccttgggaagaaaagtca
cgatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatccaggtcc
agaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggatta
tcttcaagggtcactcaaagggatctcgaagagcatttctcaaaggagggaaaggtgaag
tcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataaca
atggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaa
ggccggtccataacggtggagaagtctcgtagaaaaaggccaaggactccaacacctggt
cattatcttgggcttcatcagagcgcaaggggtgatggttatcatggtgatcggggtagg
tatcgtggccgtggtgactatgggtaccgaagatctcctagacgctctccatatagaggt
gggcgagattattctcctagacactctccatatagaggtgggcgagattattctcctaga
cgctcaccttatgctggaaggtcgagacgtgcgcgatcccggtcatattctccttatgag
aggaactaccctcgtggttatagataa
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