Solanum pennellii: 107011934
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Entry
107011934 CDS
T04130
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107011934
03036 Chromosome and associated proteins [BR:
spen03036
]
107011934
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107011934
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107011934
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107011934
microRNA pathway
RISC loading complex
107011934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107011934
NCBI-ProteinID:
XP_015067109
UniProt:
A0ABM1G7M9
LinkDB
All DBs
Position
2:42438791..42446998
Genome browser
AA seq
1041 aa
AA seq
DB search
MDRGNYRRGGGHDNAGRGGGNRGRGQGRGGGRGEPQIGGGRGGTQIGGGSQMGQPPQQWG
NQPRGSGQYQIRGGAPQNQPGQNYPVNQNPGRGGTWVNQPVQRGGGGGSAWPRPQQQGSG
VPNTTWARPPPQQQGSGGGVANAWARPPPQRIQQHGGGNQQQVVDRAPPQSSDPVQVDLG
SLKITDQSPSSRPESSKEKRVPIARPDTGKIAVKSIALLANHFPVRFNPQSTIMHYDVDI
QQRADGNRPVKKLTNKSVLHMIREKLCADDPTRFPLDKTAYDGKKNIFSAVQLPTGCFAV
NWSDGEDARLRSYDITIKLVAELKLCKLKEYLSGSLSHIPRDILQGMELVMKENPTRCRT
SVGRCFYSNEHLPDHDFRFGVAAYRGFQQSLKPTKGGLALCLDYSVLALRKPMPVLDFLK
EYLGESNENTFRNNIRAAKGALVGLKVRVIHRRTSQKFLIKQLTDCKTREITFPLEDPEG
INPPRDVLLVDYFRDKYQREIQFKDYPSLDIGKGNKKNYVPMEFCVLVEGQRYPKEDLDK
DTALFLKNISLARPQDRRQAICEMVRAGDGPCGAVTRNFDIGVDRNMTRVPGRILPPPDL
KLGGQNRFPVNDKCQWNLVGKSVVEGKALQRWALIDFSAHDRKPFFRLRVDEFVFRLKDR
CRKLSINMEEPAVVHLTDMHELSAVGKVKELLDGVVAEAKRKINGELQMIVCVMTSKHNG
YKYLKWVSETKIGVVTQCCLSTNANKGQDQYLANLCMKINAKLGGSNMELMDRLPNFRNG
DNVMFIGADVNHPAAKNVTCPSIAAVVATVNWPAANRYAARVCPQVHRTEKILEFGKMCA
DLVRTYEEINLVKPNKIVVFRDGVSEGQFDMVLNEELLDLAKAIYDSDYQPAITLVVAQK
RHHTRLFPEGGPANVPPGTVVDTIIVHPSDFDFYLCSHFGGLGTSKPTHYHVLWDDNGFN
SDSLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRMYQEVLMEMNSPRSTTSSSPT
ASFQQTFYDLHSDLQNVMFFV
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtggaaactaccgacgtggtggcggtcatgataacgccggcagaggtggaggt
aaccgtggtcgaggtcaaggccgtggtggtggaaggggtgagcctcagatcggaggtgga
aggggtgggacccagattggtggtgggtcccaaatgggtcagcctccacagcaatgggga
aatcagccgaggggatcgggtcaataccagattcgtggtggggctccgcaaaatcaaccg
ggtcaaaactatccggttaatcagaatccgggtcgtggtggtacttgggtaaaccaaccg
gttcaacgtggtggtggtgggggtagcgcttggccacggccacaacagcagggtagtggc
gttccaaacactacttgggcccgaccaccaccgcagcaacagggtagtggtggtggagtt
gctaatgcttgggcccggccaccgccgcagaggattcagcagcatggtggtggaaatcag
cagcaggttgtggatcgtgctcctcctcaatcttctgatcctgttcaagttgatctgggg
tccctgaaaattacagatcagagtccatcatctcgaccagaaagttccaaggaaaaacgt
gtacctattgcacgacctgatactggaaaaattgctgtcaagtcaattgcgctgcttgct
aatcattttcctgttagatttaatccccagtctaccattatgcattatgatgtggatatt
caacagagggctgatgggaatcggcctgtgaagaagctaacgaacaagtctgttctccat
atgataagagaaaagctgtgtgcggatgaccctacacgatttcccctagataaaactgca
tatgacggtaagaagaacattttcagtgctgttcaacttcctactgggtgttttgctgtg
aactggtctgacggggaagatgctaggttacgctcttatgacattaccataaagcttgtt
gctgaattaaaactttgcaagttgaaagaatatttgagtggaagcctatcgcatattcct
cgtgatatactacaaggaatggagttggttatgaaagaaaatcctactaggtgcaggact
tctgtaggtcgttgtttctactctaatgagcacctgcccgaccatgactttcgttttggt
gttgctgcatatagaggttttcagcagagcctaaagcctacaaaaggagggcttgcgttg
tgcttagattactcggtcttggcactccggaaaccaatgccagtgctagactttctgaag
gaatatttaggagaatctaacgaaaataccttcaggaacaacattcgagctgcaaagggt
gcattggttggtttgaaagtcagggtaattcatcgtcgtacaagccagaagtttcttatt
aagcagctgactgactgcaagactcgtgaaattacttttccccttgaagatccagaaggc
ataaatcccccaagggatgttcttcttgttgactacttcagggataaatatcagcgggag
attcagttcaaggattatccttcattagatattggaaaaggtaataagaaaaactatgtc
ccgatggaattctgtgtcttggttgagggacaacggtatcccaaggaggatttggataaa
gatactgccttgtttctgaagaacatatcactagctcgaccccaagatagaaggcaggct
atttgtgaaatggtacgggctggagatgggccgtgcggggctgtcacccgcaattttgat
attggagttgataggaacatgacccgtgttccaggtcgtattcttcctccccctgatttg
aagctaggcggtcaaaatcgatttcctgtgaatgataaatgccagtggaaccttgttggg
aaatctgtggtggaaggcaaggcgcttcagcgatgggctttgatagattttagcgctcac
gatcgcaaacccttctttaggctacgagttgatgaatttgtcttcagattgaaagatcgg
tgcagaaaattgagtattaatatggaagaacctgctgtagtacatttgactgacatgcat
gaactctctgcagttggcaaggttaaagaacttctcgatggtgtggttgctgaagctaaa
cggaaaatcaatggtgaacttcaaatgatagtttgtgttatgacatcaaagcataatggg
tacaaatatcttaaatgggtatctgagacaaaaattggcgtagtaacccagtgttgcttg
tctactaatgccaacaagggacaggatcaatatcttgcaaacctgtgtatgaagatcaat
gcaaaacttgggggcagcaatatggaacttatggatagactccctaattttagaaatgga
gacaatgtcatgttcatcggagctgatgttaatcatcctgctgcaaagaatgtgacatgt
ccatccatagcagccgttgttgccaccgtcaactggccagctgctaatagatatgctgct
agagtttgtcctcaggttcacaggactgagaagattctagagtttggaaagatgtgtgca
gacctagttcgtacttatgaggaaatcaacttggttaaaccaaacaaaattgttgttttc
cgtgatggtgtgagtgagggtcagtttgatatggtactcaacgaagagttgcttgatttg
gcgaaggctatatacgacagtgactatcaaccagcaattactcttgttgtggctcagaag
agacaccatacacggctatttcctgagggtggccctgccaatgtgcctcctggtactgtt
gtggatacaataattgttcatccctctgattttgacttctatctttgcagccactttgga
gggttgggtaccagcaagccaactcactatcatgttctatgggatgataatggtttcaat
tctgacagcttacaaaagcttatatacaacatgtgtttcacttttgcgcggtgcactaaa
cctgtctcacttgttccaccagtttactatgcagaccttgttgcttataggggacggatg
tatcaagaggtgcttatggagatgaactctcctaggtctacaacttcatcttctccaact
gcctcatttcaacaaacattttatgatttgcactctgatttgcagaacgtaatgtttttc
gtctga
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integrated database retrieval system
