Solanum pennellii: 107012027
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Entry
107012027 CDS
T04130
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107012027
Enzymes [BR:
spen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
107012027
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107012027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
107012027
NCBI-ProteinID:
XP_027770272
LinkDB
All DBs
Position
2:complement(47587564..47593354)
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AA seq
638 aa
AA seq
DB search
MAGPKLGKKSSSKLGKLPAKKKQKKEPLPAKPLEKEELFSDSEGTDGDFQEDDEQEINSD
SEMSSDIDDPFAADILGSGDADDGSDVNSDSNADSDSDADDNDLVRKSKAIDDERKREEE
DNDLELQLNIKEEADDFRLPTTEELEEETQRPPDLSNLQRRIKEIVRVLSNLKSLRQEGV
TRKDYVDQLKRDLGSYYGYNDFLIESLVELFPPVELIELIEAFEKPRPISLRTNTLKTRR
RDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPVGATPEYMAGHYMLQSASSFLPVMALA
PQENERVVDMAAAPGGKTTYVAALMKNSGIIYANEMKESRLKSLTANLHRMGVTNTIICN
YDGRELPKVLGQNTADRILLDAPCSGTGVISKDESVKTSKTAPDIQNCSQLQKELILAAI
DMVDANSKSGGYIVYSTCSIMVEENEAVIDYALKKRDVKLVPCGLDFGRPGFIRFRQHRF
HTSLDKTRRFYPHVHNMDGFFVAKLKKMSNSKSAAKSLVLSEEVQGAESIENSDQQDSEE
DDDKNSDKEGIANENRKLKEEVAGDKKRKRDVQTHSVKKGVGQNSGGATKNGKTENQVVA
TKKREKKKPLPREEIAKAREEKRKALREATRKATMKNK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcccaagctcggtaagaaatcaagttctaaattagggaaactccctgcgaag
aagaagcaaaagaaggaacctttgccagctaagccactggaaaaggaggaactttttagt
gatagtgaaggaacggatggggattttcaagaagatgatgaacaggaaattaattcagat
tctgagatgtcttctgacattgatgacccctttgctgctgatatattaggaagtggtgat
gctgatgatggttcagatgttaattcggattcaaatgcagattctgactctgatgcagat
gataatgatcttgtaaggaagtctaaagctattgatgatgaaaggaaaagagaagaagag
gacaatgatttagaactacagctcaatattaaagaagaagctgatgatttcagactgcca
acaactgaggagcttgaagaagaaacacagagacccccagatctctctaacctccaaagg
aggataaaagagattgttagagtgctttcaaatttgaagtcattgaggcaagaaggtgtg
acacgtaaggattacgttgatcaacttaaaagggacttgggttcatattatggatacaat
gattttctgattgagtcattggtggagttgtttccccctgttgagctgattgaacttatt
gaagcatttgaaaaacctagaccaatttctctacggacaaacactttgaagactcgcaga
cgggatttagctggcgttcttcttaacagaggtgtcaatttggacccattaagcaaatgg
tcaaaggttggactagttgtatatgattctcaagttccagttggtgccacccctgagtat
atggctggtcattacatgctccaaagtgcaagttcttttctgcctgtaatggcccttgct
cctcaggagaatgaacgtgtcgttgatatggctgctgctcctggaggcaaaacaacttat
gttgctgcactgatgaaaaatagtggtattatttatgcaaatgagatgaaggagtcgaga
cttaaatctctcactgctaatttacatcgcatgggggtaacaaacaccattatctgcaac
tatgatggaagagagttgcctaaagttttgggtcagaacactgctgataggattttgctg
gatgctccctgcagtggcactggggtaatctccaaggatgagtctgttaaaacttccaaa
actgcacctgatatacaaaattgctcacaattgcagaaggaactaatacttgcagcaatt
gacatggttgatgccaactcaaaatcaggtggatacattgtgtattcgacctgctccatt
atggttgaagagaatgaagcggttatagattatgcactcaagaagagagatgttaagctt
gttccatgtggacttgattttgggaggcctggatttattcgctttaggcagcaccgtttc
cacacatctttggacaagacaaggcgattctatcctcatgtgcacaacatggatggattt
tttgtagccaagttgaaaaagatgagcaattccaagtctgctgcaaaatcattggttctg
tctgaagaagtacaaggtgctgaaagcattgagaacagtgaccagcaggattctgaagag
gatgatgacaagaattcagataaagaaggcattgcaaatgagaataggaaattgaaagag
gaagtagcaggtgataaaaagaggaagagggatgtccaaacacattcagttaagaaaggt
gttggacaaaacagcggtggtgcaactaaaaatggaaaaacagaaaaccaagtggtggca
acaaaaaagagggaaaagaagaaaccccttcctagagaggaaattgcaaaagctagggaa
gagaagaggaaagcacttagggaagctacacgaaaagccacgatgaagaacaaatga
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