Solanum pennellii: 107012056
Help
Entry
107012056 CDS
T04130
Name
(RefSeq) abnormal spindle-like microcephaly-associated protein homolog
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107012056
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
107012056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
CH
Arm
PH_15
Rib_mS39_PPR
Motif
Other DBs
NCBI-GeneID:
107012056
NCBI-ProteinID:
XP_015067274
LinkDB
All DBs
Position
2:48276124..48287048
Genome browser
AA seq
1533 aa
AA seq
DB search
MEPKKPSQASCSSPFQDLPFSSSSSTSLLKDISNFKTPKHSRKANFISSSPSPYRQPEFF
TALKTTPVSSVRRRGSIKPSAVKSSAARRLKAFELEQSKSARKALNDKERSLKSLAKSLT
VWLNFLFENPSSCGCDVTKFTGGFERSNRACIAENGKRESGPGYTVGVDVLWRGPKRQRH
LLSNSEDEETTVFSDSMFFGLKDSLMEICSFDDLKERMSAYLSLGSCKEVFLTMTQLTKT
IDEGRLKMRAHCPLVTDVGMKEKALKILMCYNPTWLWIGLHIILGGDTLLPNGDVNSEQE
IAFLKMVLERQFFSHVGLAKTYAYNKLVEGLYRPGYYEKLGNIVLKRFLLLVLILDRVKT
QSSLPLKYGIDGLDGGSPLLFSSQSDVKSSRQLINKFLPSDVMHGEGNLLAHLVIVGYKV
TYQQNPLLEYQFGVADLFEDLQDGIQLCRVVQLLRHDPSILSKMVVPSDTRKKSLANCGT
VLLFLQEAGVSLCDQDGTILMAEDIVGGDKELTISLLWNMFVHLQLPLLINKSLLSEEIS
KIQGVVKQNSNDCTHLDMLLSWIQAICGSYDLKVKNFSSLVDGKAMWCLLDYYFRKDHRC
SCSYQALCETKEEVSIVSAVDYTDAVHNFILSQKLPLLLGKFPEVIQVSDILETNGACNG
QSVIILLVFLSYQLLVKRNKDQLNFHKLLGFNCQSPERRRLSTDQWFMHPQAAVDKEQTH
WKDGEDAARNFKAVMAWWQEMAQQNNKCFSKETSSSPKRSFIVRGSNDTYKGNAAKVIQS
HFRQSVQQRKYLRIKNAVYILQAAIQAWLWVKREPSIQFFGSPAYLASLCGTRSRSANFE
KHAAFVIDRHAFLKLKRSVIIIQRASRDWIYRKHVPGNSLLQDLLTPTFTDAAIVIQKCI
RGWIARSCLVNTDQFHEVPKECEDNIHHINTEIAIQCASNEYELSSSLHSHHFAATKIQS
YYRGWLMRKNFVDQKQATIKIQSIFQSARCLRDFHSYKQETLSVITIQAYIRRWIAKRDV
YRHKSQIIMIQSHCRGWLTRRKLLIEKEAVIRIQTAVRSLKYRKAFLHQKHAVLEIQRFA
RGAITRKRLLGASCYRNVSKLGYQALELKILLQAVVKLQRWWRCKLLHAQRTKAAVVIQS
HVLGWIARKRASRSKERLLQAVLKLQRWWRSKLLHEQRTKAAVVIQSHILGWLVRQSISR
NKDQLLQATLKLQRWWRDKLLHKQKTKAAVVIQSHVQGWKARQSASRKKHLTLLAVLKLQ
RWWRGKLLHKQRTKSAIVIQSHVRGWISRQSVSRNKHRIVVIQAYMKGYLARKDLRGQLL
DLRLKIQKSAANVDNGMRIINRLVAALSELLNMRSVSDILHICATLNMATQHSEKCCEEL
VAAGAVGTLFKLIRSLSRSIPDQEVLKPALSTLRNLSRYPHLIDVLIESCGSLETIVSEF
LRNKEEGYFIASDLLKKIFTENKGVEAVRKSPALLKRLHNHVEELSRRAKAEKRTKPHAT
KEPVDKRLREAVEILELIKVSMGNPTRRLSMKV
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgaaaaaaccgtcacaagcttcttgctcctcacccttccaggaccttccattt
tcttcatcatcttctacttctcttctcaaagatatctccaatttcaaaactccgaagcat
tcacggaaagcaaattttatttcttcttctccttctccgtaccgacagccggaattcttc
actgccttaaaaactacaccggtatcctctgtccgtcgccgtggaagcataaagccgtct
gcggtgaagtcgagtgctgctcgaagattaaaggcgttcgagctcgagcaatcaaaatca
gcacggaaggcgttgaatgacaaagagagatctttgaaatcattagcgaagtctctaacc
gtgtggctcaatttcttgtttgaaaatcctagctcttgtggctgtgacgtgacgaagttt
actggaggatttgagaggtccaatagggcgtgtatcgcggaaaatgggaagagggagagt
gggccagggtacactgttggagttgatgtgctatggagagggccgaagaggcagagacat
ttgttgtcgaattctgaagacgaagagacaacagttttttcggactccatgttttttgga
cttaaagattcgttgatggagatttgcagctttgatgatttaaaggagagaatgagtgct
tacctaagcttaggaagctgtaaagaagtctttcttacaatgactcaactaacaaagacg
attgatgaaggacggctgaaaatgcgagctcactgtcccctggtaactgatgttggaatg
aaggagaaagccttgaaaatcctgatgtgttataaccccacttggctttggattggattg
cacataatcttggggggtgacaccttattaccgaatggagatgtcaattctgaacaagaa
attgcttttttgaagatggtgcttgagagacaatttttctcacatgttggtctagcaaag
acctatgcttataacaagttagtggagggtttatatagacctggttactatgaaaagtta
ggcaacattgttctgaagagatttttgctgcttgttctcatactagatagagtcaaaaca
cagagtagtctgccacttaaatatggtattgatggattagatggaggatctcctttactt
ttctcttcacaatcagatgttaaatctagccgtcaactgattaacaaattcttgccatcg
gatgtgatgcatggtgaaggtaatctacttgcgcatcttgtcatcgtaggctataaagtg
acatatcaacagaatccgttgcttgagtatcaatttggtgtggctgatttatttgaagac
cttcaagatggcattcaactttgcagagtcgttcagctcttgcgacatgatccttctatc
ctctcgaaaatggtcgttccctcagatactcgcaagaagagtttggcgaactgtggcact
gttctactatttctccaggaggcaggtgtatcattgtgtgatcaagatggaactatactt
atggcagaagacatagttggcggagacaaggagcttaccatttcattgctctggaacatg
ttcgtgcacttgcagttgccacttctaatcaacaaatcacttttgtccgaggagatttct
aaaatccaaggagttgttaagcaaaactcaaatgactgtactcacctggacatgctcctg
agttggatccaggcaatttgtggaagttatgatctcaaggtcaaaaatttttcatcattg
gttgatggtaaagctatgtggtgcttgcttgattattatttccgcaaggaccaccgctgt
tcctgctcttatcaggcactctgtgaaacaaaagaagaagtttccatagtatctgcagtt
gattacacagatgcagtgcacaattttattctatctcaaaagctgccactgctattgggg
aagtttccagaggtaatacaagtcagtgatatactggaaacaaacggtgcttgcaatggc
cagagtgtcattattctcttggtgttcctctcatatcaactactagtaaaacgaaacaag
gatcaattaaacttccacaagttattgggatttaattgtcaaagtcccgaaaggagacgg
ttaagcacagatcagtggtttatgcatccccaagcagctgtagataaagaacaaacacat
tggaaggatggtgaagatgctgccagaaattttaaggctgtaatggcttggtggcaagag
atggctcaacaaaataacaaatgcttttctaaggaaacttctagcagtccaaagcggtct
tttattgttagagggagcaatgatacttataaaggaaatgctgcaaaagtaatacagtca
catttcagacagtcagtgcagcaacgtaaatatttgaggattaagaatgctgtttatatc
ttgcaagctgcaatacaagcatggctgtgggtaaagagagaaccatcaattcagttcttt
ggttctccggcgtatctggcatcactatgtggtacaaggagccgttcagcaaactttgaa
aaacacgctgcctttgtgattgatagacatgcttttcttaagttgaaaagatctgtaata
atcatccagcgtgcctcaagagactggatttatcgaaaacatgtaccgggaaattcgttg
ctacaagatttgttaactccaacattcactgatgcggccattgtcatacaaaagtgtatt
cgtgggtggatagcgaggtcttgtcttgtaaacacagaccaatttcacgaagttcctaag
gaatgtgaagataatattcatcatataaatactgagatagcaatccagtgtgcttcaaat
gaatatgaattaagcagttctctacacagtcatcactttgcagcaaccaaaattcaaagt
tactatcgtggatggttgatgagaaagaattttgtggatcagaagcaagcaacaataaaa
atacagagcattttccaatctgcacgatgtttgagggattttcattcctacaaacaggaa
actctgtcagtgattacaatccaggcttatatccgcagatggattgctaaaagagatgtt
tataggcataaatctcaaattattatgattcagagccattgtcgtggctggttaacgagg
agaaaactgctcattgaaaaagaggctgttataaggattcaaactgcagttcgaagcctg
aaataccggaaagctttccttcaccaaaagcatgccgttttggaaatacaacggtttgca
agaggagccattactagaaagaggctcttaggggcctcttgctaccgcaacgtctcaaaa
ttgggttaccaggctcttgaacttaaaatactactgcaagcagtagtaaagttgcaaagg
tggtggcgatgtaaattgcttcatgcacagagaacaaaagctgcagttgtcatccaatcg
catgttttaggatggattgcccggaaacgtgcttcaagaagcaaggaacgattacttcaa
gcagtattaaagttgcaaaggtggtggagaagtaaattgcttcatgaacagagaacaaaa
gcagcagttgtcatccaatcacatatcctaggatggttagtccggcaaagtatttcaaga
aataaggaccaattacttcaagcaacattgaagttgcaaaggtggtggagagataaattg
cttcataaacagaaaacaaaagcagcagttgtcatccaatcgcatgtccaaggatggaaa
gcccgacaaagtgcttcaaggaagaagcacctaacactgctagcagtattaaagttgcaa
aggtggtggagaggaaaattacttcataaacagagaacaaaatcagcaattgtcatccaa
tcgcatgtccgaggatggatatcccggcaaagtgtttcaagaaacaagcaccgaattgtt
gtgatccaagcatacatgaaaggataccttgcaagaaaagatttaagagggcagcttctt
gatttgcgtctgaaaatacaaaaatctgctgcaaatgttgataatggtatgcgcataata
aacaggcttgtcgcagcattatcagaacttctgaatatgagaagtgtcagtgacattctt
catatctgtgcaactctgaatatggcaacacaacattcagaaaagtgttgcgaagaactt
gttgctgcgggtgctgttggtacattgtttaagctgatccgctctctcagccggagcata
cctgatcaagaagttcttaaacctgctctctccactctcagaaacctttcccgatatcca
catttgattgatgtactaattgaaagttgtggatcactggaaacaatagtgtcggagttt
ttaagaaacaaagaagagggatatttcattgcttccgaccttctgaagaagatattcaca
gagaacaaaggtgttgaagctgtgcgcaagtcgcctgctcttttgaagagactgcacaac
catgtggaagagctttcgagaagagcaaaagctgagaagaggactaaacctcacgcaacg
aaagagcctgtggacaaaagattgagagaagctgttgagatattggaattgattaaagtg
tccatggggaatcctactagacgactctctatgaaggtgtaa
DBGET
integrated database retrieval system
