KEGG   Solanum pennellii: 107012410
Entry
107012410         CDS       T04130                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
spen  Solanum pennellii
Pathway
spen03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107012410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107012410
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107012410
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107012410
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 107012410
NCBI-ProteinID: XP_015067736
UniProt: A0ABM1G983
LinkDB
Position
3:complement(74728899..74733697)
AA seq 128 aa
MSWASPEDIYTSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDL
YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaagtccagaagatatctatacctccacttctcttgcaagttatcttgac
aagaaacttcttgtgctgttgcgagatgggcgaaagcttttaggaatacttcgttctttt
gaccaatttgctaatgctgttcttgaaagtgcatgtgagcgtgctattgttggtgatcta
tattgtgatatcccattaggtctctatattatacgtggggaaaatgttgtgttaattggt
gaactggacgtggataaggaggagcttcctccccatatgacacgtgtttcagaagctgag
ataagaagggcacagaaagcagaaagggactctacagatcttaaaggctcaatgaggaag
aggatggagtttcttgatatggattaa

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