Solanum pennellii: 107012434
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Entry
107012434 CDS
T04130
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 8
KO
K05391
cyclic nucleotide gated channel, plant
Organism
spen
Solanum pennellii
Pathway
spen04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107012434
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spen04040
]
107012434
Ion channels [BR:
spen04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107012434
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
107012434
NCBI-ProteinID:
XP_015067771
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Position
3:complement(70575183..70581382)
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AA seq
690 aa
AA seq
DB search
MFGNYKSQIIGGQKEKFVRLEDANSDISFKSDMAGRTKYGFNIEGHATNPSKSIKLGVKR
GSEGLVTFGRTLKSGVTRAVFPEDLRVSDKRIFDPQDKSLLFWNRLLVISCILAVSIDPL
FLYLPVFKDEGKCLHIDESLATIVSWMRTAVDLFYLIRMVLQFRTAFIAPSSRVFGRGEL
VIDPKQIATRYLSRYFVVDFFSILPAPQIVIWRYLGGSRGSDVLITKTLLSYIILIQYIP
RFLRFIPLSSDLKKTAGVFAETAWAGAAYYLLWFVLASHIFGAIWYLLAVERKDTCWNEA
CTENDQCKDKLSYLYCSREGNFNLTEWQNIGKSVLDEKCAEEEKFSYGIYARAVTTNVLD
TEDFVIKYCFCLWWGLQNLSTLGQGLETSTYTKENLFSIILAISGLLLFALLIGNMQTYL
QSLTVRLEEMRVKRRDSEQWMHHRVLPPELRERVRRYDQYKWLETRGVDEESLVQNLPKD
LRRDIKRHLCLNLVRRVPLFENMDERMLDAICERLKPSLCTERTYIVREGDPVGEMMFII
RGRLESVTTDGGRSGFFNRGILKENDFCGEELLTWALDPKSGSNLPPSTRTVKALTEVEA
FALEAEEVKYITSQFRRLQSRQVQHTFRFYSQQWRTWAASFIQAAWRRHTKRKIAELRQI
EEMEEDGFNENDDGETEFTPMLHKSPERPY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtaattacaagtcgcagattattggaggacaaaaagaaaagtttgtaaggtta
gaggacgctaactctgacatatcgtttaagtctgatatggctggaaggacaaagtatgga
tttaatatagagggtcatgcaaccaacccatccaagtcaataaaactgggtgtaaaaaga
ggatctgagggactagtgacatttggtagaacactgaaatctggcgttacccgagcagtt
tttccagaagatttgagagtttcagataaaaggatatttgatcctcaagacaagtctctc
ctgttctggaataggttattggtcatatcatgtattttggcagtatctattgatcctcta
tttctctaccttcctgtttttaaggatgaagggaagtgtctccacatagatgaaagttta
gcaacgatagtaagttggatgcggacagcagttgatctcttttaccttatccgcatggtt
ctccaatttcgaacagcttttattgctccatcttcccgtgtttttgggcgaggtgaactt
gtaatagatcccaagcaaatagcaaccagatacctcagccgttactttgtagtggatttc
ttttccattcttcctgcaccgcagattgtgatatggagatatcttggtggatcaagaggt
tcagatgtattgattacaaagacattattatcgtacatcatcctcattcaatatattcct
agatttttgcggtttattccattaagttcggatttgaaaaagactgcaggggtgtttgca
gaaactgcttgggctggtgctgcatattatctgttgtggtttgttctagctagtcatata
tttggggccatctggtacctgttagctgtcgaacgcaaagatacatgttggaatgaagca
tgtaccgaaaatgaccagtgcaaagataaattatcttatctgtattgttcacgagaagga
aacttcaatttgacagaatggcaaaacattggcaagagtgttcttgatgaaaaatgtgct
gaggaggagaaattttcatatggaatatatgcaagagctgtaacaactaatgttcttgac
actgaagatttcgtgatcaaatattgtttctgtttgtggtggggcttgcagaatttgagc
acacttggtcaggggcttgagaccagtacctatacgaaggaaaatctcttttcaataata
ttggccatttctggactcttactatttgctcttctcattggaaacatgcagacctatctt
cagtctctaacagtacgacttgaggagatgagggtcaaaaggcgtgactcagagcagtgg
atgcatcacagagtacttcctcctgagctaagggagagagttcgacgttacgatcagtac
aaatggttggaaactagaggagtagatgaagagagtttggtgcaaaatctgcccaaagat
cttaggagggatattaagcggcatctctgtctgaatttggttagaagggtgcccttgttt
gagaacatggatgagagaatgcttgacgccatatgtgagagattgaaaccaagtttatgc
accgaaagaacatatatagttagagaaggagatccagttggtgaaatgatgtttataatc
cgtggtcgcctagaaagtgtaacaactgatggtgggagaagtggattcttcaacagaggt
atcttgaaagaaaatgacttctgtggtgaggagctgctaacatgggcattggatccgaaa
tccgggtctaacttgccgccatcaactaggacagtcaaggctttgacagaagtagaggca
tttgccttagaggcagaagaagtgaagtacattacatcacagttcaggcggttgcagagt
cgacaggtacagcacacttttaggttttactcgcagcaatggagaacctgggctgccagc
ttcatacaagctgcatggcgccggcatacaaaaaggaaaattgcagaacttcgtcaaatt
gaggaaatggaagaggacggatttaatgagaacgatgatggagaaactgagtttactcca
atgctgcacaaatctccggagagaccatattag
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