KEGG   Solanum pennellii: 107012482
Entry
107012482         CDS       T04130                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
spen  Solanum pennellii
Pathway
spen03020  RNA polymerase
spen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107012482
  09124 Replication and repair
   03420 Nucleotide excision repair
    107012482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spen03021]
    107012482
   03400 DNA repair and recombination proteins [BR:spen03400]
    107012482
Transcription machinery [BR:spen03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107012482
  RNA polymerase III system
   RNA polymerase III
     107012482
  RNA polymerase I system
   RNA polymerase I
     107012482
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107012482
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 107012482
NCBI-ProteinID: XP_015067827
LinkDB
Position
3:complement(4333890..4338338)
AA seq 145 aa
MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL
ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM
QLRGDPSIAAKFELDQKIFLLIRKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggttgaaactctgtttgaagatatatttacagtcactcagaaagatcctgatggaaaa
aaatttgatcgagtgaatcgcattgaagcacggagtgagcagtttgatatgttcatgcta
ctggatgtaaacactgagatatatcctatgcgcgtgaaggataaatttatgatggtttta
gcttctactttgaacttggatgggacaccagatactggttatttcattcagggtaacaag
aaatcacttgctgacaagttcgaatatgtcatgcatgggaagctatataggatctcagag
gaaggttccgggaagcacgttaaagctgacatttttgtttcatttggaggactgcttatg
cagctgagaggagatccatccattgcagctaagtttgagcttgatcagaagattttcctt
ctcataaggaaggtttga

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