KEGG   Solanum pennellii: 107012565
Entry
107012565         CDS       T04130                                 
Name
(RefSeq) DNA polymerase epsilon subunit B isoform X1
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
spen  Solanum pennellii
Pathway
spen03030  DNA replication
spen03410  Base excision repair
spen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107012565
   03410 Base excision repair
    107012565
   03420 Nucleotide excision repair
    107012565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spen03032]
    107012565
   03400 DNA repair and recombination proteins [BR:spen03400]
    107012565
Enzymes [BR:spen01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107012565
DNA replication proteins [BR:spen03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    107012565
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      107012565
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE DUF5523
Other DBs
NCBI-GeneID: 107012565
NCBI-ProteinID: XP_015067925
UniProt: A0ABM1G9Q6
LinkDB
Position
3:64756360..64762338
AA seq 529 aa
MSGVLRNKVQRKFKMRGYSLKVEALSEVLSFLSHFPSDAFDDALELLLDELHHLSLKSSI
LDREPVHKVVSLLLEADAAVEENPSSSSSSASALRVIDTFIVPKFRYDPVKKFFHEHTGR
LPIHGDASAKATLYKDRFLLLFQRVSRDPRFSTLAFDASSSDYGSCEISPIQSLVGRVGR
RWIMGVISQLEDGHFYLEDLTAAVEVNLSSAKITTGFFLENTIVLAEGEMQLDGVFQVRT
CGFPPLEDREKSMAFFSGLDFFGGGILTKEETLRLAELEKNAVNDMFVILSDVWLDNEET
LGNLETILNGYENVEVVPSLFVFMGNFCSQPFNLSFKSISSLRVQFGKLGQMIASHQRLK
EHSRFLFIPGPDDVGPSTALPRCTLPKYLTEEFQKYVPNAIFSSNPCRIKFYTQDIVLFR
HDMLYRMRRSCLIPPSMEETSDPFEHLVATIIHQSHLCPLPLTVQPIIWNYDHGLHLYPT
PHTIVLGDKSEQKAFRYTGVTCFNPGSFSNDGTFVAYRPCNQEVELSAL
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgagcggagttttaagaaacaaagtacagaggaagttcaagatgagaggttactctctc
aaagttgaagctctctccgaagtcctctctttcctttcccatttcccttccgatgctttc
gacgacgctcttgaactccttcttgatgagcttcaccatctttcattgaagtcctcgatt
ttggatagggaaccggtgcataaagtggtgagccttttattggaagcagatgccgccgtt
gaagagaaccctagctcaagttcttcatctgcttctgcccttagggttattgatactttt
atcgtccctaaatttagatacgatcctgttaagaagttctttcatgagcacacagggagg
cttcccattcatggtgatgcttctgcaaaagccaccttatacaaggatagattcctctta
ttgtttcaaagggtatctcgtgatccacggttttcaactcttgcttttgatgcctcttct
tctgattatggcagctgtgagatatctcccattcaatcacttgttggacgagtagggaga
agatggataatgggagtaatatctcagttggaggatggtcatttctacttggaagacctt
actgcagctgttgaagtaaatttatcgagtgcaaagataactacaggtttctttttagaa
aatacaattgtcttggcagaaggtgaaatgcaattggatggtgttttccaggtcagaaca
tgtggttttcctccattagaggacagagaaaagtccatggcgtttttttccggactagac
ttctttggtggtggtattcttaccaaagaggaaactctaaggcttgcagagctggagaaa
aatgctgtgaatgatatgtttgttatactatctgatgtatggctggacaatgaggagact
ttgggaaatctggagacaatcctcaatggttatgaaaatgtagaggtggttccttcttta
tttgtcttcatgggaaacttctgctctcagccatttaatctttcattcaagtccatctcc
agtctcagagttcagtttggaaagcttgggcaaatgattgcatcgcaccaacgactaaaa
gaacatagtcgatttctttttatccctggtcctgatgatgtaggtccttcaacagcctta
cccagatgtactttgcctaaatacctaactgaagaatttcagaaatatgttcctaacgca
atattctccagtaacccatgcagaatcaagttttatacccaagacattgttctattccgc
catgatatgctttatagaatgcgaagatcgtgtctgatacctccctcaatggaagaaacc
agtgatccatttgagcatcttgttgcgactataatacatcaaagccatctctgccctctc
cccttgacggttcaacccattatctggaattatgatcacggtctacacctatatccaacc
ccgcatacgatagtgttgggggacaaaagtgagcagaaagctttcagatacacaggagtt
acatgttttaatcctggttccttttcaaacgatggcacatttgtggcataccggccgtgc
aatcaagaagtagaattatcagcgttgtaa

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