Solanum pennellii: 107012589
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Entry
107012589 CDS
T04130
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
spen
Solanum pennellii
Pathway
spen04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107012589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spen04040
]
107012589
Ion channels [BR:
spen04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107012589
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
107012589
NCBI-ProteinID:
XP_015067951
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Position
3:complement(68444892..68450779)
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AA seq
677 aa
AA seq
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MNSLLGHLNRFKNSLIYDQQKPFWKQIHDPNGEFVSRWNHIFLFTSFVGLFVDPLFLLLP
IIIDNCMGTDNVLGYAIIVFRLMVDCFACFQIYLKFRTAFVSKKTRVFGKGELVMDRRLI
AIRYLKNAFVIDVAAALPLPQIVIWFIMPLNGSSPSHANHSISLIIMLQYVPRFLVIFPL
NSKIIKNTGVVAKTAWSGAGYNLLLYLLASHVLGAIWYLMSIERHFSCWTDECVKKKKGS
PDCNHDYLDCSSLNKPGRQEWSETTEVFDRCDATRDITFEFGMFGDANTERVTSASFFDR
YFYCLWWGLKSLSSYAQSITTSTNIVETLLSSLICLLGLVFFALLIGNMQSYLQSMTARL
EQWRIKRRDTEEWMRHRQLPEDLQDRVRRFVQYKWLATRGVEEEEILLSLPLDLRRQIQR
HLCLALVRRVPFFSQMDDQLLDAICECLVSSLNTKDTFIVREGDPVNEMLFIIRGQLESS
TTNGGRSGFFNSIVLNPGDFCGEELLTWALVPNPNLNLPSSTRTVRCLTEVEAFALRAEK
LKFVANQFRRLHSKKLQHAFRYYSHQWRTWGACYIQAAWRRHRRKILGEELSREESLYYR
GGMDQDDNYGREYPEAGGNASDQATESSTQQLGVLASRFAANTRRGKAGRVDSGESSLRM
PKLFKPDEPDFSHDPSS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaattctctcctaggccatctcaaccgcttcaagaattccctgatttacgaccagcaa
aagcccttttggaagcagattcatgatccaaatggcgaatttgttagcagatggaatcac
attttcctcttcacttccttcgtcggtctctttgtggatcctctctttttgttgcttcct
attattatcgataactgtatgggcaccgacaatgtattgggttacgccataatagtattt
cgcctaatggttgattgcttcgcctgctttcaaatctatttgaaattccgtacagctttc
gtttccaaaaaaactcgggtttttggcaagggtgagctggtgatggatcgacgattgatc
gctattcgttacttaaaaaacgcctttgtcattgatgttgctgctgccctccctctccca
caaattgttatttggtttataatgccattgaatggctcatcaccctctcatgctaatcat
tccatctctttgatcattatgcttcagtatgtgccgagatttttggtcattttcccctta
aattcaaagattattaagaatacaggtgttgttgcaaagacagcttggtctggtgccgga
tacaatcttctcttatatttgctagcaagtcatgttttaggagctatatggtatctgatg
tctattgagaggcacttttcatgctggacggatgagtgcgtgaagaagaaaaagggttct
cccgattgtaatcatgactaccttgattgctcatcacttaataaacctgggcgtcaggag
tggtcagaaaccactgaggtattcgaccgctgcgatgctacgcgcgatataacatttgag
tttggaatgtttggtgatgcaaatactgaaagagttacatctgctagcttctttgatcga
tatttttactgcctatggtggggtttaaagagcttaagttcatatgcacaaagtattact
accagcactaacattgttgagacgctcctttctagtcttatttgtcttctgggtttggtc
ttctttgcactgctgataggcaacatgcagagctatctacaatccatgacagcaagactt
gaacaatggagaattaaaagaagggacactgaggagtggatgaggcaccgtcagctacct
gaagatctgcaggatcgtgttcgtcgatttgttcaatataaatggttagctacaagaggt
gtagaggaagaagaaattttactttccttacccttggatttaaggcgtcagattcaaagg
cacctctgcctggcacttgttcgtcgtgtccctttcttctcccagatggatgatcaactt
ttggatgcaatatgtgaatgccttgtttcatcattgaacacgaaagacacgtttattgtt
cgtgaaggagatccagtaaatgagatgcttttcataattagaggtcaacttgagagttca
acaaccaatggaggaaggtcagggttcttcaactccattgtgctaaatccgggtgatttt
tgtggtgaagaattgctaacatgggccttggtgcccaacccaaatcttaatcttccatct
tcaactcgaacagtgagatgccttacagaagttgaagcatttgcacttagagctgaaaag
ctcaagtttgtcgcaaaccagttcagacgcctccatagtaagaaactacaacatgcattt
cggtactactcacaccaatggaggacatggggagcttgctacatacaagctgcatggaga
cgccataggaggaaaatactaggggaagaattatcaagagaagagagcttgtactacagg
ggagggatggaccaagatgacaattatggtcgtgaatatccagaagctggtggtaatgct
tcggatcaggcaacagaaagcagtactcagcaacttggagtattggcatcaagatttgct
gctaataccagaagaggcaaggcgggacgtgtggactctggtgaatccagcttacgtatg
cctaaactttttaagcctgacgagcctgatttttctcatgatcctagtagttga
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