Solanum pennellii: 107012934 Help Entry 107012934         CDS       T04130                                  Name (RefSeq) protein SHORTAGE IN CHIASMATA 1   KO K28108   shortage in chiasmata 1 Organism spen  Solanum pennellii Brite KEGG Orthology (KO) [BR:spen00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:spen03036]     107012934 Chromosome and associated proteins [BR:spen03036]  Eukaryotic type   Meiosis-specific proteins    Others     107012934 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HTH_11 Motif Other DBs NCBI-GeneID:  107012934 NCBI-ProteinID:  XP_015068393 LinkDB All DBs Position 3:3381980..3392408 Genome browser AA seq 1626 aa AA seqDB search MRTRFIGKDYFNSAQFPAGDFLRLPLPHLPTSNTSIFEHLHCFDGLPTLSIDVEIERFPI EKTLSRFFSYVFPHRIDVELAEFADPRPFAGKLDVDEQGSCSPEETSGITTEGSLVSYGK GKDNLEMVQFEIPELDSSSLQLLEDIPHFGKENMLFPSEISDDGNKLDMPGFEVRLQHSL DTLQSICSVDDICSVSFLEKSSDWLEDSGSSQGKHHSSTYAFPLLEVDEAGLGIVGENSI KEKVLIFENIELQRETPGSEGMGNINELLDSTKFDTLQHLSNDSLPTDCLEVEVPCLNFS LEMNLISIIELEKNSVIHQGRENDGPIWVGSPIIFDELQFFDSDLYTFCELLSEVKVDVE DTCDLMLRETENFRTFDELIVSHELIPVDNSFRSLPVPLISENGNIKSLHLCLKEILSEL EPQSSSMSDGLYLDWHFMEEEKCKCREDFFNLLGEKDANNIDLCLNFIDNEMLVSDFLFS SDSPQEPNRVESKEMLSLPSNATPVSPMPYNVEVPTKLLKDGKFSTEGVSSQCNSKKASL FGDSWSEFNDLDFFLNPKEYGRDKDYKPADSSIDTNTMGQSRFLSSDTTLVQPQQWNIKV HQILLSSDILLLIDDLRKIFQVIFERRRELIETQDPSQAVDDIAILRLSKKKLINLIKKR TLCRTSLFQDGDNTISLVTLCAIKQMVWYLCYYDLHTTYLYIEKLYRRLQELNSKLDFLY NYINDVHQKGEKDIHKFHPSLSVIKDLLQSFVSKGSSKILVVAEPVFWWSLKKLLTSMNI AFSHPHNGQKNDFFKLEDASMQMISHCCLVTQEHLSASFPFEKFEIILEYGGSQGSSKVS SILPKSDRVPPLHFLKVELEDPSVAKALCDGVDMSNTDEPSMGGGPHSFSALNEIDVTVE ELLNFLPVEKNLKGASVETLLGNEAFSAAAQHAVFSLGSEQNRGSTDGCPETIIIVNTQN FDKEMVISRRTAYQKILALEKKGVQVVERDLRQPVDIIVSASACLAWYDCKNIAKKATAP DEAFSCLPLCVENIAASILTSLSFAFSGCILVFEGESDFISGIMESSDELYAAAASLGMD IQIFYSYSSEMTDEIILSCIELCSRTSRGLYSKMPESQTLAESFLTAFPSINSLSAHAIL SSAGLLAEFLGWTREHRIHAVQKYQVPDESIILLSALSRFGERDDSKSVMTDCSSSVSSA PDSESLHFKRTYGRSKQKTTWDIENLNIPTREVYDLDPPRTFSEGRLHPRASGLRDSLIS DDINFFDEFGKSSLSFDNEPCVHRQSLDTYPTKDLFKVTDLCDYQITNNSQMGGGDINKF RTPQIDVCLHPREEVDLGMMNQLGRQNNYSGNFADHIAGEVINIDDTVGSGKAFHNAKYK SFSTLVHAMETPTTGVPTAAKKLFFGASDLEFLNTVEIDSSLDACTSVRDLGQGMGQHLN AGSNHKKIQFKHQKWVPDEGISQKRMQPVMAKQEKNAASHGETPLSNALQSTPLQQGSPW TIEFLNRIREKSRSRQQSVPCDLSAPCYGYPGKPSKVTKRKSPSTLELYKYQGNSFQEAA TRRKRRMKCMQLPASSSEKASDRPVSSWTPVDKRAKRELSFATSGNGGQTKLVWNDKNSH TLGRRY NT seq 4881 nt NT seq  +upstreamnt  +downstreamnt atgcgaactcgatttatcggcaaggactacttcaattccgctcaatttccggccggcgat ttcctccgcctccctcttccacacctccctacttcgaacacctccatttttgaacacctt cattgttttgacggacttccaacacttagtatcgatgttgaaattgagagatttccgatt gagaaaactctatctcgcttcttctcatatgtctttccgcacaggattgatgttgaactt gctgagttcgcagatcctcggccgttcgccggaaagcttgacgttgacgagcagggaagt tgcagtcccgaggaaacaagcggaattactacagaggggagtttggtttcctatggcaag gggaaggacaatctcgaaatggtccagtttgaaattccagagctggattcatcctcactt caattgctagaagatatccctcattttggaaaggagaacatgctgtttccgtctgagatt tcagatgatggaaataagctggatatgcccggttttgaagttaggctgcaacattccctt gatactctgcaatcaatttgttcagtggatgacatctgttctgtgtctttcctggagaaa agctctgattggcttgaagatagtggttctagtcaggggaaacatcattctagcacatat gcctttcctcttctcgaagtggatgaggcaggtttgggtattgtgggagaaaactctata aaggagaaagttctaatctttgaaaatattgagcttcagcgtgagacaccaggaagtgaa ggaatgggcaacataaatgagcttttggattccacaaagtttgatacattgcaacacctg tcaaatgacagtttaccaacagactgccttgaagttgaggttccgtgcttgaatttctct ttggagatgaatttgataagtattattgaacttgagaaaaactcggtgattcatcaaggc agagaaaatgatggtccaatatgggtaggtagccctatcatttttgatgaactgcaattc tttgattcagacctttatactttttgtgaattgctgtctgaagtaaaagtagacgttgag gatacatgtgacctgatgttgagggagactgagaatttcaggaccttcgacgaattgatt gtttcccatgagctcatccctgtggataattctttcagatcattgcctgtgccactaatt tctgagaatggaaatataaagtcattgcacttgtgtcttaaggaaatcctatctgagttg gagccacagtcttcctccatgtctgatggattatacttagattggcattttatggaagag gagaaatgcaagtgtcgagaagacttcttcaatttattgggagagaaagatgctaacaac attgacctttgcttgaacttcatcgacaatgagatgcttgtatcagactttcttttctct agtgatagtccacaagaaccaaacagagtggagagtaaagaaatgttgagtttaccttcc aatgccactcccgtttctcccatgccttataatgtggaagtgccaactaagttgctaaag gatggaaagttctctactgaaggagtatcatcccaatgtaattctaaaaaggcatctttg tttggtgactcctggtcagagtttaatgatcttgattttttcttaaatccaaaagagtat ggtagagacaaagattataaaccagctgacagttccattgataccaataccatgggccag agcaggtttctctcttctgataccacactagtacaacctcagcaatggaatatcaaggtg catcaaatattgttgtcttctgatattctacttctaattgacgatcttaggaaaatcttt caagttatctttgaaagacggagagagttaattgagactcaggatccatctcaagctgtg gacgatatagctattcttcgcctttcaaagaaaaagctcatcaacttgattaagaaaaga actctgtgcaggacgtctttgttccaggatggtgataacacaatatcattggtcacattg tgcgcaatcaaacagatggtttggtacctttgctactatgatctgcatacaacatatcta tacatagaaaagttgtacagaaggttgcaggaattgaactctaaacttgacttcctctac aactacataaatgatgtgcatcagaagggtgaaaaagatatacataagttccatccatca ctttctgtgattaaagatttactgcagtcgtttgttagcaagggtagttcaaaaatattg gttgtggctgagccagtgttctggtggtcattgaagaaactattaacttccatgaatatt gcatttagccatccacataatggacaaaagaatgattttttcaaattagaagatgccagc atgcaaatgatctcacattgctgtttagtaacccaagagcatctgtctgcctcatttcca tttgaaaaatttgagatcatcttggaatatggaggttcacaaggatcatctaaagtatct tccatcctgcctaagtcagatagagttcctcctcttcatttccttaaggtggagctggag gaccccagtgttgcaaaagcactttgtgatggcgttgacatgtccaacactgacgaacct agtatggggggaggtcctcactctttctctgctctcaatgagattgacgttacagttgaa gaactgctgaatttccttccagtggaaaagaacttgaagggtgcaagtgtggagacatta ctgggaaatgaagcattctctgctgcagctcaacatgcagtgttcagtttaggatctgag caaaatcgtggaagcacggatggctgtcctgagacaattattatagttaacacacagaat tttgataaggaaatggtaatttcaaggagaactgcataccaaaagattcttgcgctcgag aagaaaggagtacaggttgtagagcgtgatttacgtcagcctgtcgatattatagtcagt gcatcagcttgccttgcttggtatgactgcaagaacattgcaaagaaagctactgccccc gatgaggctttctcttgcttgcctctgtgtgttgagaatattgcagcaagtattttgacg tcactcagttttgctttcagtggctgcatcctggtctttgagggagaaagcgactttata tcaggaattatggagtcatctgatgagctctacgctgctgctgctagcttgggcatggat atacagattttttattcatattcttctgagatgactgatgagatcatattatcgtgtatc gaactttgctcgaggacaagtagagggctctattctaagatgcctgagtcacaaacgctg gcagaatccttcctgactgcatttccttcaattaattcactctcagctcatgcaatattg tcttcggcaggcttgcttgctgagtttctgggatggactcgtgaacatagaattcatgca gttcaaaaatatcaagttcctgatgaaagcatcatattactgagtgctttgagcagattt ggggaacgggatgattctaaatcggtaatgacagattgctcctcttcagtttcttctgct ccggactccgaaagtcttcatttcaaaagaacctacgggaggtcgaaacaaaaaaccacc tgggatattgagaatctgaatatacctacaagggaagtatatgatcttgatccaccgaga acattttctgaaggcagacttcatcccagagcatctggcctgcgagattctttaatttca gatgatatcaacttctttgatgaatttgggaagtctagcttatcatttgacaacgaacca tgtgttcacaggcagtcattagacacctatccgacaaaagatctttttaaagtaactgat ctctgtgactaccagataactaataattcacagatgggaggtggtgatataaataaattc aggactccacaaattgatgtgtgtttgcatccaagagaggaagttgatctgggtatgatg aaccaattgggtagacaaaacaactattcaggaaattttgcagatcatatcgcaggtgag gttattaacattgatgatactgtcggatctggcaaagcctttcataatgcaaaatacaag tccttttctaccctggtgcatgcaatggagactcctactacaggagttcctacagctgct aaaaaactcttttttggagcaagtgatctagaatttctaaatactgtggaaattgactct agcctagatgcctgcacttctgtgagagaccttgggcaaggaatgggacagcatttaaat gcaggttccaatcataagaagattcaatttaagcaccagaaatgggtcccagatgagggt atatcccagaaaagaatgcagccagtcatggcaaagcaagaaaagaatgcagccagtcat ggcgaaacaccactctcaaacgcacttcaatccactccattgcagcaaggatcaccctgg acaatcgaatttctgaacagaatcagggaaaagagtcggtcacgtcagcaatctgtccca tgtgacttatctgctccttgttacgggtaccctgggaaaccatcaaaagttacaaagaga aagagtccatctactctggaactctacaagtaccaaggaaacagtttccaagaggctgca actaggagaaagaggcgtatgaaatgcatgcagctaccagcatcctctagtgagaaggct tcagatcgtcctgtttcatcatggacacccgttgataaaagagcaaaacgggagctatcc tttgcaacaagcggaaatggagggcagactaaactggtatggaatgacaagaactctcat acattgggaagacgatattaa

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