Solanum pennellii: 107012980
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Entry
107012980 CDS
T04130
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107012980
Enzymes [BR:
spen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107012980
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107012980
NCBI-ProteinID:
XP_015068444
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Position
3:complement(21894731..21896674)
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AA seq
449 aa
AA seq
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MGGPKIKYSFLFLCITFATIIPSLMAHIGHYDEVWRRRAEEAKEYARKIYEPHPENVTLS
FNQKLRDTMKELKKVKGTHNNSTRRGLGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLA
DCAMGFGSKATGGKDGEFYVVTDNSDDYNDPKPGTLRHAVIQKEPLWIIFKRGMNIRLHQ
EMIMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHDIVEGNGGMVRDAVDHIGI
RTKSDGDGISIFGASNIWIDHVSMQRCYDGLIDAVEGSTGITISNGHFTDHNEVMLFGAS
DSSSIDQVMQITLAFNHFGKRLIQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIITQ
GNRFIAPPDIFKKQVTKREYNPESVWMQWTWRSEGNLFMNGAYFTESGDPEWSSKHKDLY
DGISAAPAEDVTWMTRFAGVLGCKPGKPC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtcctaagataaagtatagcttcctgtttctctgtatcacttttgctacaata
ataccaagtcttatggctcatattggtcactacgacgaggtgtggaggagaagagccgaa
gaagcaaaggagtatgcccgtaaaatatatgaaccacatcctgaaaatgtcacactttca
tttaaccaaaaacttcgggacacgatgaaggaattaaagaaagtgaaaggtacacataat
aatagcacaaggaggggtctagggacaaaaaagtacactggaccttgcatggtcacaaat
ccaattgataagtgttggagatgtgatcctaattgggcagacaataggaaaaaattagca
gattgtgcaatgggatttggatctaaggccactggtggcaaagacggtgaattctatgtt
gtcacagataattctgatgattataatgatccaaaacccggaactcttcgtcatgctgtt
atccaaaaggagccattgtggatcatatttaaaaggggtatgaacattaggttgcaccag
gagatgatcatgcagagtgacaagacgatagatgctcgtggtgttaatgttcacattact
aaaggtgctggtataaccctccagtacatcaagaatgtgatcatccacggacttcacatt
catgacatcgttgagggtaatggtggaatggttcgggatgctgttgaccatattggtata
cgtacaaagagtgatggagatggcatttcaatcttcggtgcatcaaatatatggattgat
catgtgtctatgcaacgttgttatgatggtttgatagatgctgtagaaggatcaacaggt
atcactatatcaaatggacatttcactgatcacaatgaggtgatgttgtttggtgcaagt
gatagttcttcgattgatcaagttatgcaaataacattagctttcaatcattttggaaag
agattgatacaaagaatgccaagatgtcgatggggatatatacatgttgttaacaatgat
tatactcattggaatatgtatgccattggtggtagcatgcatcctactatcattacacag
ggtaatcgttttatagcaccaccagacatcttcaagaaacaggtaacaaaaagggagtac
aatccagaatcagtttggatgcaatggacatggagatcagaaggaaatctattcatgaat
ggtgcatacttcactgaatcaggagatccagaatggtcaagcaaacacaaagatctttat
gatggaatatcagcagccccagcagaagatgtcacttggatgactagatttgcaggtgta
cttggctgcaaaccaggaaaaccttgttag
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