Solanum pennellii: 107013023
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Entry
107013023 CDS
T04130
Name
(RefSeq) protein SHI RELATED SEQUENCE 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107013023
Transcription factors [BR:
spen03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107013023
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
BORG_CEP
Motif
Other DBs
NCBI-GeneID:
107013023
NCBI-ProteinID:
XP_015068491
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All DBs
Position
3:5419372..5422504
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AA seq
323 aa
AA seq
DB search
MAQFFSLGGGGREATNSQEYHHHHHQETTNSTHNWFLYKHHDQELSTYKGFELWQQQQQQ
QQQQSHHNEEEQNYQILRNPIINSFGLDIGPSHDHHHHHETNMMMRSSTITISCQDCGNQ
AKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLASLQQQEKEDNNKSKRQK
DDSYTGLEVANSFPSKVNSTAVFQRVRMSSIEENEDQIAYQAAVNINGHIFKGILYDQGD
NHEYNYMNGGDHDSSSGGDPVPRQYNLNLTRTATSAANDATVGGGGVASAVAAEGSSHFL
ETSLYSSINTFATGTQFFPPSRS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcccaattcttttcactaggaggaggaggaagagaagcaacgaatagtcaagaatat
catcatcatcatcatcaagaaaccactaatagtactcataattggttcttgtacaaacat
catgatcaagaattatcaacatacaaaggtttcgaactatggcaacaacaacaacaacaa
caacaacaacaatctcatcacaacgaggaggagcaaaattaccaaattcttcgaaaccct
attattaattcatttggattagatattggacctagtcatgatcatcatcatcatcatgag
actaatatgatgatgagaagtagtactattacaataagttgccaagattgtgggaatcaa
gctaagaaagattgtcaacatatgaggtgtaggacttgttgtaagagtagaggttttcaa
tgtcaaacacatgtgaaaagtacttgggttccagcagctaaaagaagagaaaggcaacaa
caacttgcttctttgcaacaacaagaaaaagaagataataacaagtccaaaagacaaaaa
gatgattcatataccgggttagaagttgcaaatagttttccatcaaaagtaaattcaaca
gctgtgtttcaacgtgttagaatgagttcaattgaagaaaatgaagatcaaatagcatat
caagctgctgttaatattaatggacatatattcaaaggaatattatatgatcaaggtgat
aatcatgagtacaattatatgaatggtggtgatcatgacagctcatcgggtggagatccc
gtgccacgtcagtataatcttaatcttactcgcaccgccacgtcagcagccaatgatgcg
actgtagggggtggcggtgttgcttccgcagtggccgcggaaggatcatcacattttcta
gaaacttctttatactctagtattaacactttcgcgacaggtactcaattttttccacct
tcaagatcttga
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