Solanum pennellii: 107013598
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Entry
107013598 CDS
T04130
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107013598
03036 Chromosome and associated proteins [BR:
spen03036
]
107013598
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107013598
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107013598
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107013598
microRNA pathway
RISC loading complex
107013598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107013598
NCBI-ProteinID:
XP_015068960
UniProt:
A0ABM1GC00
LinkDB
All DBs
Position
3:complement(66656206..66661119)
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AA seq
893 aa
AA seq
DB search
MASKELFPYLPPPPKEIPSGVVPIKAEPGKGCDSVSERLMPNFNQMNRPRPGVKGKKIHL
LTNYFRVCFQGGISQLYSYNVNILYENGDPVTGSNLIRKVIHKLWEIYSSELGEQVFASD
GQQSLFTTSLLPQKKLDFTVVLDAATSKRCKTDGNLSGDGELSEGDQKRQKIISRFKTFR
IQINFVSIIPFKTMPDGNHGVKSRNNEVLIALDTILQHSNAKRNCLLLRQSYFPNEMKNF
MELTGGILGCRGFHSSFQSVQGGLYFNLDTSTTTLIQPGSLVNFLMANQNVETPFKIDWT
KAKILKNLRIKLLHSDREHKITGLSNRTCKEEKFLLRSRGSNNQNDNGQTVELTVYEYFV
RRCGIELGYSSNLPCINVGSQHKPQFIPVELCSLVPLQRFKKELSLHQRSLLVNNSSQKP
IELMKHLNEELKANDYNTDPMLRACGISINKSYTEVEGRVLSPPQLRVGNKENLASRFSR
WSFNGKKFADPKSIEFWAVVNFSSGHDIRAFCIEMAKLGAMRGMHIHPPSFVFEENAKHK
KKPGSVRVDKMFEQMISKFRKDPPRFLLSFLPAKFSNLYGPWKKKCLMTFGIRNQCIAKN
KVDETYLANVMLKINAKLGGLNSMLSAEVSKTIPLVSKVPTMILAMGVTHAPSSRSDLPS
VAAVVGSRQWPMISYYRASTCIQPPKTETIHSLFRPVSDREDTGMIRELLMDFHASSGNR
KPEQIIIFRQGLGESQFKHVFSEMEEIIKACKFLDETWSPKFTLIVAQRRHHTKLFQANS
SDNIPPGTVVDTKICHPLYNNNFYICAHAARVGTSRPIHYFVLLDEIGFSSDTVQELVHC
LCYVSQRCTSAIYEVAPIRYARLVSAQMLEIMKTEGPELPMLHKNVRDTMFFC
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaaggagttattcccatatttgccaccacctcctaaagaaattccctcaggt
gtggttcctataaaagctgaaccagggaaaggttgcgattcagttagtgagagattgatg
ccaaactttaatcagatgaacagacctcgtccgggggtcaagggaaagaagatacatctg
ctgacaaattattttagagtatgctttcaaggtggcataagccaactatattcatacaat
gttaatatcctatatgaaaatggggaccctgtaactggaagcaacttaattagaaaagtg
attcataaactctgggagatatacagctctgagttaggagagcaagtatttgcttctgat
gggcaacagagcttgttcacaactagtcttttaccacagaagaagctagatttcactgtt
gtacttgatgctgcaacatcaaaaaggtgcaagacggatggcaaccttagtggcgatgga
gaattaagtgagggtgatcaaaagaggcagaagattatatcccgattcaaaactttcaga
atacagataaactttgtttccatcatcccctttaagacaatgcctgatggaaaccatgga
gtaaaatcaagaaataatgaagttttgatagcattagacaccattttgcaacactctaat
gcaaaaaggaattgccttctgctccgccaatcgtacttccccaatgagatgaagaacttc
atggaattgactggtggtatccttggatgccgaggttttcactcgagtttccaatctgtt
caaggtggattatatttcaaccttgatacatctactacaacacttatacagccaggttca
ctagttaactttttaatggccaaccaaaatgtggaaactcccttcaaaatcgactggaca
aaggcgaaaatcttgaaaaatctcagaattaagctattacactccgatagagaacacaaa
atcactggacttagcaacaggacatgtaaagaggagaagtttcttctgcggtcgagggga
tccaataatcaaaatgacaatggccagactgttgagttaactgtttatgaatattttgtt
aggaggtgtggaatagaactcggttattcatcaaacttgccatgcatcaatgtggggagc
cagcacaaaccccagttcattcctgttgagctctgttcattggttcccttgcaacgattc
aaaaaggaattatccttacatcaaagatccttattagtgaacaactcgagccaaaagccg
atagaactaatgaagcatttaaatgaggaacttaaagccaacgactataacacagacccc
atgctgcgcgcttgtggaatctcaattaataaatcttatactgaagtagagggaagagtt
ctatctcctccacagttgagagtgggaaacaaggaaaatcttgcttcaagattttcgcgc
tggagctttaacggcaagaagtttgcagatccaaaaagcattgaattttgggctgtggtg
aacttctcttctggtcatgacatacgtgctttctgcattgaaatggcgaaattgggtgca
atgagaggaatgcacattcatccaccatcatttgttttcgaagagaatgctaagcataaa
aagaaaccgggatctgttcgagtggacaagatgtttgaacaaatgatttcaaaatttcgc
aaggatcctcctcgattccttctttcctttcttcctgcaaagttttctaatttatatggt
ccatggaagaaaaagtgtcttatgaccttcggaattcgtaaccagtgcattgcaaagaac
aaagtcgatgaaacttatcttgctaatgttatgttaaaaattaatgcaaaacttggtggt
ctgaattctatgttatcagctgaagtttcaaagactatccccttagtttctaaagttccc
acaatgatcttagcaatgggcgttacacatgccccttcttcacggtcagatttaccctcc
gttgctgcagtggtcggttctagacagtggccgatgatttcttactatagagcatctact
tgtatccaaccaccaaagaccgaaactatacattctctctttagaccagtttcagatagg
gaggacacaggcatgatcagggagctcctaatggattttcatgcaagttcagggaatagg
aagcctgaacagattattatattcagacaaggtttaggtgaatctcaattcaagcatgtc
tttagcgaaatggaggaaattattaaggcctgtaagttcctggatgagacttggtctcct
aagttcactcttattgttgcacaaagaagacatcacacaaagttgttccaagctaattcc
agtgacaatattcctcctggaacagtcgttgatactaaaatttgtcatccgctgtataat
aacaacttctacatatgtgcacatgcggcaagagttgggactagcaggccaattcactac
tttgttctgttggatgaaataggtttctcatctgatactgtgcaggaactagtccattgt
ttatgttatgtgtctcagagatgcaccagtgctatatatgaagtggctccaattcgttat
gctcgtttggtttcagctcagatgttagaaattatgaagactgaggggcctgaactgcca
atgttgcacaaaaatgtgcgcgatacaatgtttttctgctga
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