Solanum pennellii: 107013681
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Entry
107013681 CDS
T04130
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
spen
Solanum pennellii
Pathway
spen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107013681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107013681
03036 Chromosome and associated proteins [BR:
spen03036
]
107013681
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107013681
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107013681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
107013681
NCBI-ProteinID:
XP_015069037
LinkDB
All DBs
Position
3:complement(70842992..70850667)
Genome browser
AA seq
1033 aa
AA seq
DB search
MEVDLGNPEQLIVSQSQCKRRKISALDQILGENEADLPTLRSPDYFTEPCLSELAVRELM
SSGYCSKVENFTVGRFGYGFVKFSGETDVRGLDLDRIVKFSKHEVIVYEDENDKPPVGMG
LNKPAEVTLLLEIRSSKHCDVDSSRDLVEKLRLRTERQGACFISFDPSNGEWKFFVQHFS
RFGLNDEEEDEDMIIDGVSPEVQDPADMIGADVSDIDEETCLANTTDLSHSLPAHLGLDP
VKMKEMRMLMFPAEEEDIDDYPGVPFDRKPQFGIESSKSPLQHKFQRVSPPLTRKTPLAL
IEYKHGSFGSDSPGSILLTQQNKGVLLKTTKTEGFKLDVRQQTPISGTYSCNVVDAGLFM
GRSFGVGWGPNGVLIHSGAPVGSKDNQSLSSIINLEKVAFDQVARDENKKVREELVDLCF
DSALHLHKEITHETKEFGEGPFVLKLQRLVCDRLILSDVCRSYIGVIERQLEVPDLSPAS
RVLLMHQAMIWELIKVLFSTRQLSGQLKSLEDEDEEDMIPDARETAADVDREALPLIRRA
EFSYWLQESVCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACLLSQ
AGGSMVNRSDVARQLDIWRVNGLDFNFVETERIRVLELVAGNIHRALHDVDIDWKRFLGL
LMWYQLPPETELPIVFRTYQRLLNEGKAPSPVPVYIDEGPIEVSMNWNAVKHFDLGYYLM
LLHANQEIDFSALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGAFSSNDLHVLDISFISQ
LLCLGQCHWAVYVVLHMPHREDCPYLQAALIREILFQYCETWSSQDLQRQFMEDLGIPSA
WLNEALATYFNYYSEFPKALEHFLECGKWQKAHTIFMTSVAHSLFLSEEHSEIWRLAASM
EDHKSEIEDWDLGAGIYISFYLLRSSLLEDSDTMNQDTIENKDNACADFISRLNNSLAVW
TNRLPVKARVVYSKMAEEICSLLLSGSGRSSSNEVQLSCYDTIFKAPIPESTRAYHLQDA
VSLFTSYLSEVSS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgatttagggaatcctgaacaacttattgtttctcagtcacaatgtaaaaga
agaaaaatttctgctttagatcagattttgggcgagaacgaagctgatttacctaccttg
cgatctcctgattattttactgagccatgcttgagtgaattggctgttagggagcttatg
agttcagggtattgcagtaaagttgaaaattttactgttgggaggtttggttatggattt
gtaaaattttctggggaaacagatgttagggggttggatttggatcgaattgttaagttt
agcaaacatgaggtgattgtatatgaagatgaaaatgacaagcccccagttggcatgggg
cttaacaagcctgctgaagtaactttgctactggaaatacgatcctccaaacactgtgac
gtggattcttctagagatctggtggagaaattaagacttagaacagagagacaaggagca
tgttttatctcatttgatccatcaaatggagaatggaaattcttcgttcagcatttcagc
agatttggtttgaatgatgaggaagaagatgaagatatgattattgatggtgtgtctcct
gaagttcaagatcctgcggatatgatcggagcagacgtttctgacattgatgaagaaacc
tgtttagccaatacaactgacctctcacattctcttcctgctcatcttgggttagatcct
gtaaagatgaaagaaatgagaatgctgatgtttccagcagaagaagaggatatagatgat
tatcctggtgttccttttgatagaaaaccacaattcggtatagaatcttcaaaatcccct
ttgcagcataagttccagagagttagtccacctttaactcgcaagactccattggccttg
attgaatacaaacatggtagttttggctcggactcacctgggtccattttgttgacccaa
caaaataagggtgtgcttctaaagacaacaaagactgaaggtttcaagctggatgtcagg
cagcaaacacctataagtggaacctactcttgtaatgttgttgatgcggggttgttcatg
ggtagatcatttggagttggctgggggcctaatggtgttcttattcattctggcgctcca
gttggtagtaaagacaatcagtctttgtcctcaataatcaatttggagaaggttgcattt
gaccaagtagctagagatgaaaataaaaaggtcagggaggaacttgttgatttgtgtttt
gattcagccctccatcttcacaaggaaattactcatgaaaccaaagagttcggggaggga
ccctttgtgttaaagcttcaaagacttgtgtgtgatcgtctaatactttcagatgtatgt
cggagctatattggtgtcattgagaggcaattggaggttcctgacttatctccagcatcc
cgtgttcttctgatgcaccaagcaatgatttgggaattaataaaagtgcttttctcgaca
agacaattgagtgggcaattaaagtctcttgaagatgaggatgaggaagatatgatacct
gatgcgagagaaactgctgcagatgttgatcgagaagcacttccattgataaggagagca
gaattcagctattggttgcaagagagtgtttgtcacagggtacaggaagaagtaagttct
ttgaatgattcaagtgatctacaacatatgtttttacttctaactggtcggcagctggat
gctgctgtggaactggcagcttctagaggagatgtgcggcttgcatgtcttcttagccaa
gctggtggttcgatggttaatcgttctgatgttgctaggcagcttgatatttggagagtg
aatgggttggacttcaattttgttgagacagagaggattagggttcttgagttggttgct
ggcaacattcatagagcattgcatgatgtagacattgactggaaaaggtttctggggttg
ttgatgtggtatcagcttccaccagaaactgaattgcctattgtgttccgcacatatcag
aggcttctcaatgaaggaaaagctccgtctccagttccagtttatattgatgaaggacct
atagaagtgtcaatgaattggaatgcagttaaacattttgacctcggttactatcttatg
cttcttcatgccaatcaagaaattgatttcagtgctctaaagacgatgttcagtgccttt
gcttcaacaaatgatccccttgactaccatatgatctggcatcagcgagctgttttagaa
gccattggtgctttcagttctaatgatcttcatgtgctagacattagtttcatttctcag
ctgctatgccttggtcaatgtcattgggctgtctatgtggtacttcacatgcctcaccgt
gaagattgtccttatttgcaagctgctcttattagggaaatactcttccagtactgtgaa
acttggagttctcaggacttgcagcggcaatttatggaggatctaggtattccatcagca
tggttgaacgaggctctggcaacatattttaattattactctgaattccccaaagcccta
gaacactttttggagtgcggaaagtggcagaaagcgcacactatttttatgacttcagtt
gctcattctctttttctatcagaagaacactcagaaatatggaggctagcagcatccatg
gaggatcacaaatcagaaattgaagattgggatctgggagctggaatatatatatctttt
tatttgttgagaagttctttgctggaggacagtgacactatgaatcaagacactatcgaa
aacaaagacaatgcttgtgcagactttatcagtcgcttaaacaactctttggctgtttgg
acaaacagattgcctgtcaaagcgagggtggtttattcgaaaatggctgaggagatatgc
agtttgctgctttctggtagcggtagaagttcatcaaatgaggtccagctaagctgctac
gataccatattcaaagcacctatacctgaatctacacgcgcataccatttgcaggatgct
gtgtcactttttacatcttacctttctgaggtgtcgtcatag
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integrated database retrieval system
