Solanum pennellii: 107013725
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Entry
107013725 CDS
T04130
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107013725
Spliceosome [BR:
spen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107013725
Complex C
U4/U6.U5 tri-SnRNP related factors
107013725
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GFIT
Motif
Pfam:
MA3
Lipoxygenase
MIF4G
VMAP-M1
Motif
Other DBs
NCBI-GeneID:
107013725
NCBI-ProteinID:
XP_027771448
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Position
3:complement(70044856..70047228)
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AA seq
594 aa
AA seq
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MEETVEYQKKNWIALKKSINGLLNKINRANIKYIIPELFGENLIRGRGLFCRSIMKSQLN
SPIFTDVFAALVAVINTKFPQIGELLCKRMILQLQRAYKNNNKPQMLATVKFIAHLVNQQ
VVDELVALELVTLLLDIPTDASVDVAVDFVKECGSMLQDLCPNSYWPRDSPEWTKDQVPL
SAFERFGKKLGEIEDRIIQMNGDNQKWKNRSGPVKVPYTLLFPTSEEGLTGKGIPNTLEL
VTLLLDKPTDDSVDVAVDFVKECGSMLQDLCPLGLHVTVXPPAVPLELDLVEEEDQITHE
ISLGDKIDPQIELDVFKPELNFVQNENKYVELQKRILGGGGDQDEESENEDEGEDERKIE
DETETNLINLRRTIYLTIMSSGDFEEAGHKLLKIRLEPGQEMELCIMLLECCSQEKTFLH
YYALLGQRLCMSNKVYQKNFDNSFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVL
AYLRLTEEDTTSSSRIFIKILFQELSEHLGINKLNDRLSEPSMQDAFESIFPKDSLKNTR
FAINFFTSIGLGGITENLRDYLKNMPSLILQQDKRDFRSSQSDDVHQSKRRRRS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaccgtagagtaccaaaagaagaattggattgctctaaaaaagagcatcaat
ggactgctcaacaaaatcaatagagccaacataaaatacatcattcccgaattatttggg
gagaatttaatccgtggtaggggcttgttttgcagatcgattatgaaatcacaattgaat
tctcctattttcaccgatgttttcgcagcattggtcgctgttattaacacgaaattcccg
caaattggtgaacttttgtgtaagaggatgattctgcaattgcaaagagcttataaaaat
aataataaacctcagatgttagcaactgtaaagtttattgctcatcttgttaatcagcaa
gttgttgatgaacttgtagctttggaattagttacacttttgctcgatatacctaccgat
gctagtgttgatgttgctgttgatttcgttaaggaatgtggttcgatgcttcaggatctg
tgtccnaattcctattggccgagggactcacctgaatggacaaaggatcaagtaccactt
tcagcttttgagaggttcggaaagaagttgggtgagatcgaggatcgaattattcagatg
aatggtgataatcagaaatggaagaacaggtcagggcctgttaaagttccatatactttg
ctctttcccaccagtgaagagggactcacaggcaaaggaattcccaacactttggaatta
gttacacttttactcgataaacctaccgatgatagtgttgatgttgctgttgatttcgtt
aaggaatgtggttcgatgcttcaggatctgtgtcccttagggttgcacgtgaccgttntt
ccgccagctgttcctctggaacttgaccttgttgaggaggaagatcaaataacacatgaa
atctctcttggagacaagatagacccgcaaattgaattagatgttttcaagccggagctt
aattttgtccagaatgaaaataagtatgtagaattacagaagaggattctaggtggtggt
ggtgatcaagacgaagaatctgagaatgaggatgagggcgaggacgagaggaaaattgag
gatgagacagagacaaacttgatcaatcttcggaggacgatttacttaactattatgtca
agtggtgattttgaagaagcagggcataagctgttgaaaatcagactagagcctggtcag
gagatggagttatgcataatgttattagaatgttgtagtcaggagaagacttttctgcat
tactatgcacttttggggcagcggttatgtatgagcaacaaagtttaccagaagaatttt
gacaactcattcgtgcagcaatactcaatgatccatcgacttgaaactaataaactgcgt
aatgtggccaagttttttgctcatttactaggtactgatgcattgccttggcatgttttg
gcttatttaagattgacagaagaggatacaacatcttcttcgcgtatattcatcaaaatc
ttattccaggagttgtcagagcaccttggcatcaataaactgaatgatcgtcttagtgaa
ccctctatgcaagacgcatttgagtcgatatttccaaaggatagtctcaaaaatacgagg
tttgctatcaacttcttcacatccattggtttaggtgggataactgaaaatctacgagac
tatttgaagaacatgccaagtcttatcttgcagcaagacaagcgtgatttcagatcaagt
caatcagatgatgttcatcaaagtaagaggaggaggagaagttag
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