Solanum pennellii: 107013865
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Entry
107013865 CDS
T04130
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107013865
Enzymes [BR:
spen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107013865
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107013865
NCBI-ProteinID:
XP_015069234
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Position
3:67723484..67726135
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AA seq
435 aa
AA seq
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MGLTKRNLFLFFVLVVLVVSIEAHIKEFDEVWKKRAQQAKKAARHAYNPNPKIVADHLNY
QVDKAVRGSKSRRRDLQRYSGQCMATNPIDQCWRCDPNWARNRMKLTDCVLGFGRKTTGG
KGGKIYVVMDNSDNELVNPKPGTLRHAVIQPEPLWIIFAENMVIKLNQELIMTSNKTIDA
RGRQVHIAHGGGLMLQFIHNVIISNLHIHDTKAGSGGLIRDSVSHYGYRSKSDGDGISIF
GSTNVWIDHISMSNCQDGLIDAVEGSTAITISNCHFTKHNDVMLFGASDTASGDSVMQIT
LAFNHFGHGLTQRMPRVRWGFVHVVNNDYTHWLMYAIGGSMHPTILSQGNRFIAPPNPNA
KEVTKRDYAPENVWKNWVWKSQGDLMMNGAFFVESGDPKHAFLKGPDMITSKPGSSVSSL
TQFSGSLKCIEGRPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggattgacaaaacgtaatttgtttttattctttgttttggttgttttagttgttagc
attgaggcacatattaaggaatttgatgaggtgtggaagaagcgagcccagcaagcaaag
aaggccgctcgacatgcctataatcctaatcctaagattgttgctgaccatcttaactac
caagttgacaaggctgtacgaggcagcaaaagcagaagaagggacctgcaaaggtacagc
ggacaatgcatggctactaatcctatcgaccagtgctggaggtgtgatccaaactgggct
cgtaaccgcatgaaactaacagattgcgtccttggctttggccgcaagacaacgggaggc
aaaggtggaaaaatctatgtagtgatggacaattcagacaacgagttagttaatcctaag
ccgggcacattgcgccacgctgtcatccagccggagccactttggattatatttgctgag
aacatggtaattaagcttaaccaggagcttatcatgacaagcaacaagacgattgatgct
cgaggaaggcaagtacacattgctcatggtggtggccttatgttacagtttatacacaat
gtgattattagtaaccttcacattcatgatactaaggctggtagtggtgggttaattaga
gactctgtcagtcattatggttatcgatcgaaaagtgatggtgatggcatttcaatcttt
ggatcaacaaatgtttggatcgatcacatttccatgtccaattgtcaggatggtctaatt
gatgctgttgagggttccactgccattaccatttccaattgccatttcaccaagcataat
gacgtcatgttgtttggtgccagtgatactgcctcaggggactctgttatgcaaataaca
cttgcattcaatcactttgggcacggtttgacacagaggatgccgagagttagatgggga
tttgttcatgttgtcaacaatgattacacacattggcttatgtatgccattggaggaagc
atgcatcccaccatccttagccaggggaatcgttttatcgctcctccaaatcctaatgcc
aaagaggtgaccaaaagagactatgcacccgagaatgtgtggaagaattgggtgtggaaa
tcacagggagatcttatgatgaacggagcattcttcgtagaatctggagatccaaaacat
gcattcttgaaaggtcctgatatgatcacctccaagccaggatcatccgtgagcagcctg
acgcaattttcaggctctctcaaatgcattgagggaaggccttgttag
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