KEGG   Solanum pennellii: 107014066
Entry
107014066         CDS       T04130                                 
Name
(RefSeq) coatomer subunit beta'-2-like
  KO
K17302  coatomer subunit beta'
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spen04131]
    107014066
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spen04147]
    107014066
Membrane trafficking [BR:spen04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    107014066
Exosome [BR:spen04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   107014066
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_IFT122_1st TPR_GEMI5 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N WD40_like WD_LRWD1 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 107014066
NCBI-ProteinID: XP_027771708
LinkDB
Position
3:73304465..73315012
AA seq 917 aa
MPLRLEIKRKLAQRSERVKCVDLHPTEPWILTSLYSGTVCIWNYQTQTMVKSFEVTELPV
RSAKFIARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHTDYIRCVAVHPSLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLISGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAVGCMRSSRRIVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEVQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSRIKIFSKNFQ
EKKSIRPTFSAERIYGGTLLAMCSNEFICFYDWADCRLIRRIDVSVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSAHLDSGRSVDEQGVEEAFELLYEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVIGYTLLLSLVEYKTLVM
RGDWDRANEVLPSIPKEHHNSVAHFLESRGMVEEALEVATEPDYRFDLAIQLGKLEIAKD
IAVVAQSESKWKQLGELAMSDGMLEMAEECLKYANDLSGLLLLYSSLGDAEGITELATLA
KEQGKNNVTFLCMFLLGKVEECIQLLVDSNRVPEAAFMARSYLPSKVSEIVAIWKKDLSK
VNQKAAEALADPEEYPNMFEHWQVACAVESKVAEERGGGYPPATEYVNHADRSTNNLVEA
FSIMKMDEESLENGDIDHDIAEQSGDEVQELGQDDEQNEGQEEPVVVDADSTDSAVLINE
TEAEEEWGTNTEGKPSA
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgcctctgagattggagattaagaggaaacttgctcaaagatcagaaagggtaaagtgt
gtggatctacatcctacggagccatggatattgacaagtttgtattcggggactgtttgc
atctggaactaccagacccagacaatggttaaatctttcgaggtgactgaattaccagtt
aggtcagcgaagtttatagcacgcaagcaatgggttgttgccggtgctgatgatatgtac
attcgtgtatacaattacaataccatggacaaggtcaaagtattcgaagcgcacactgat
tatattaggtgtgtggctgttcatccttctctaccatatgtgctgtcatcttctgatgac
atgcttataaagctatgggactgggagaaaggatggctatgcactcaaatttttgagggt
cattcccattatgtgatgcaagtcacatttaaccccaaagataccaatacatttgccagt
gcatctcttgatcggactataaagatttggaacctcggctcccctgacccaaacttcaca
ttggatgcgcatctaaagggagtcaattgtgttgactatttcactggtggtgacaaacct
tatttgatcagtggttctgatgaccacactgctaaggtctgggattatcagactaaaagt
tgtgtccagactcttgaaggccatacacacaatgtctccgccgtatgttttcatcctgag
cttcctattataattacagggtctgaagatggtacagttcgtatatggcatgcaactact
tatagacttgagaacactttgaattatggtcttgaaagagtttgggcagttggttgcatg
agaagttcaagaaggattgtaataggttatgatgagggcactatcatggtaaaaattggc
cgagaagaacccgttgccagcatggataatagtggaaaaattatatgggctaagcacaat
gaagttcaaactgtcaatatcaagagtgtgggggcggattacgaggttactgatggagaa
aggctgcctttggctgtcaaggaattgggaacttgtgacctctatccacaaagcttgaag
cataatccaaatggaaggtttgttgttgtttgtggagatggagagtatatcatatatact
gctctagcatggagaaataggtcatttggttcagctctggaatttgtttggtcttctgat
ggagaatatgctgtgagagaaagtacgtcaaggattaagatcttcagcaaaaattttcag
gagaagaagagtatccgccctactttctcagctgagcgcatctatggaggtactctattg
gcgatgtgctcaaatgagtttatttgtttctatgattgggcggactgcaggttgatacgg
cgaattgatgttagtgtgaagaatctctactgggcggacagtggcgatctggtagcaatt
gcaagtgatacatccttctacatactcaagtataatcgtgatgtggtttctgcccattta
gatagtggaagatcagtagatgagcaaggcgtagaagaagcttttgaactcctttatgag
ataaatgaacgggtcaggaccggaatttgggttggtgattgcttcatttacaataattct
tcctggagacttaactactgtgttggtggtgaggtgaccacaatgtttcatttagaccgg
cctatgtacctgctcggatatctagcgaaccagagtagggtttttctgattgacaaagag
ttcaatgtcattggatatactttgctgctcagcctggttgagtacaagacgcttgtgatg
cgtggtgactgggacagagcaaatgaggtgctgccatctattcctaaggagcaccataat
agtgttgctcatttcttggagtcgcgaggtatggtagaggaagcattagaagttgcaaca
gagcctgactacagatttgatctagccatacagctgggaaaattagaaattgcaaaggat
attgcagtggtcgctcaaagtgagtccaaatggaagcagttgggtgaactagccatgtct
gatggaatgctggagatggcagaggaatgtctgaagtatgccaatgacttgagtggtctg
ttgctactctattcttcactaggagatgctgaaggaataactgaactagcaactcttgcc
aaagagcaggggaaaaacaatgtcacattcctttgcatgttccttttgggtaaagtggag
gaatgcattcagctattggttgatagcaatcgggtacctgaggctgcttttatggctaga
tcttatctgccaagtaaggtttctgaaatagttgcaatttggaagaaggacctcagtaag
gttaaccagaaagcagcagaagctttggctgatcctgaagaatatcctaatatgtttgag
cactggcaagttgcatgtgctgttgaatctaaagttgcagaagaaaggggtggtggctac
ccaccagcaacggaatatgtaaatcatgctgatagatcaactaacaaccttgtagaagct
ttcagcatcatgaaaatggatgaagaatctcttgaaaatggagatatagaccacgacatt
gcagaacagagtggtgatgaggtgcaagaactggggcaagatgatgaacaaaatgaggga
caagaagagcctgtagttgtggatgctgattctactgacagtgcggtactcattaatgaa
actgaggcagaagaagagtggggtacgaatactgaaggaaaaccgtcagcctaa

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