Solanum pennellii: 107014212
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Entry
107014212 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107014212
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
spen
Solanum pennellii
Pathway
spen00196
Photosynthesis - antenna proteins
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
107014212
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
spen00194
]
107014212
Photosynthesis proteins [BR:
spen00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
107014212
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Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
107014212
NCBI-ProteinID:
XP_015069551
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Position
3:549262..552316
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AA seq
550 aa
AA seq
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MATFTMALSSSTFAGKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYL
GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
ARNGVKFGDAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
LENLADHIADPVNNNAWAFATNFVPGKTTFLFVHSRVFHFTSIMATSTMALSSATFAGKA
VKLSPSSSEITGNGRITMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPG
DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS
QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFD
PLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAW
AFATNFVPGK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctacttttacaatggctctttcctcctctactttcgccggtaaagcggtgaaactc
tcaccatcttcttctgaaatcagtggaaatgggagaattacaatgaggaagactgctgcc
aagcccaagcctgcctcctctggtagcccatggtacggtcctgaccgtgttaagtacttg
ggaccattctctggtgaatcaccaagctatttgactggtgagttccctggtgattacgga
tgggacactgctgggctttcagctgaccctgaaacattcgctaagaatcgtgagttggag
gttattcattgcagatgggccatgcttggagctcttggatgtgtattccccgagctttta
gcccgtaacggtgttaagtttggtgatgctgtatggttcaaagctggatctcaaattttc
agcgagggcggacttgactacttgggaaaccctagtttggttcatgcacaaagcattttg
gctatttgggcttgccaagttgtgttgatgggagctgttgagggttatcgtattgctggt
gggcctcttggtgaggttgttgatccactttaccctggtggtagctttgacccattgggc
cttgctgaagacccagaggcttttgctgagcttaaagttaaggaaattaagaacggcaga
cttgctatgttctccatgtttggattctttgttcaagctattgtcaccggaaagggtcca
ttggagaatcttgctgaccacattgctgacccagttaacaacaacgcctgggcttttgcc
acaaactttgttcccggaaagacaacttttctttttgtacattcaagagtttttcatttt
acttctataatggctacttctaccatggctctttcttccgctacatttgccggaaaggcg
gttaaactctccccatcttcttctgaaatcaccggaaatggaagaatcaccatgaggaag
actgctgccaaggccaagcctgcctcctctggtagcccatggtacggtcctgaccgtgtt
aagtacttgggcccattctctggggagtctccaagctacttgactggtgagttccctggt
gactatggatgggacactgctggactttcagctgaccctgaaacatttgctaagaaccgt
gagttggaggttattcattgcagatgggctatgctaggagctcttggttgtgttttccct
gagcttttggcccgtaacggtgttaagtttggtgaagctgtatggttcaaggctggatca
caaattttcagcgagggtggactcgactacttgggcaacccaagcttggtccatgcacaa
agtatcttggccatctgggcttgccaagttgtgttgatgggagctgttgagggttatcgt
attgctggtggacctctcggtgaggttgttgacccactttaccctggtggtagctttgac
ccattgggccttgctgaagacccagaggcatttgctgagctcaaagtgaaggaaatcaag
aatggtagacttgctatgttctccatgtttggattctttgttcaagctattgtcactgga
aagggtccattggagaatcttgctgaccacattgctgacccagttaacaacaatgcttgg
gccttcgccacaaactttgtccccggaaagtga
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